HHsearch results for GI: 254780821 and protein with PDBid: 2x5o_A
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2jfg_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=100.00 E-value=2.1e-41 Score=273.59 Aligned_cols=311 Identities=16% Similarity=0.162 Sum_probs=202.1
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 83999458984799999999999978935141378411012008988847787155889999999998630477677957
Q gi|254780821|r 25 PVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVEDVELLDVFRRVRRVKSAQNLTIF 104 (429)
Q Consensus 25 ~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~~~~~~~~~~~i~~~~~~~~~t~F 104 (429)
++|+||||||||||+.|++++|+..|+.+.+ .+. .|.+..
T Consensus 105 ~~IaVTGT~GKTTTt~~l~~iL~~~~~~~~~--------------~g~---~g~~~~----------------------- 144 (439)
T 2x5o_A 105 PIVAITGSNGKSTVTTLVGEMAKAAGVNVGV--------------GGN---IGLPAL----------------------- 144 (439)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTCCEEE--------------EES---SSBCHH-----------------------
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCCCEE--------------CCC---CCCCCC-----------------------
T ss_conf 6899878998447999999998763865011--------------355---467301-----------------------
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 89999999874114462477764447567641356775158986025000000278523445666531137983315444
Q gi|254780821|r 105 ELSIATALVLFSKYPADCAIIEVGLGGSLDATNIIEKVAVSVITSISLDHEKILGNTVSAIAKDKSGIIKPGCPVVIGHQ 184 (429)
Q Consensus 105 E~lt~~a~~~f~~~~~d~~vlE~GlGGr~DaTnvi~~~~vavITnI~~DHle~LG~tle~Ia~eKa~I~k~~~~~v~~~~ 184 (429)
.....+.|+.|+|.+... ++... .-+|+++|||||++||+|++|+..|.+...|..|++.+..+|++.+
T Consensus 145 ---------~~~~~~~~~~vve~~~~~-~~~~~-~~~p~iavitNi~~dHld~~~~~~e~y~~~k~~i~~~~~~~v~n~d 213 (439)
T 2x5o_A 145 ---------MLLDDECELYVLELSSFQ-LETTS-SLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNAD 213 (439)
T ss_dssp ---------HHCCTTCCEEEEECCHHH-HHTCC-CCCCSEEEECCCCSCCGGGCTTHHHHHHHHHHGGGTTCSEEEEETT
T ss_pred ---------CCCCCCCCEEEEECCCCC-CCCCC-CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf ---------033578878999900355-34554-4476500102655410353111479999998653036733664351
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCC---CC-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCH
Q ss_conf 7178988999986210566523576321---01-2585244431033334444443222211111469999875320000
Q gi|254780821|r 185 VYDEVREILVSKAEKMGCPYNVYGDDFY---AF-EKNKCLVYQDKISQTNLTVLGLVGEHQYINAATAICAVQMAGFTLE 260 (429)
Q Consensus 185 ~~~~~~~~i~~~a~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~l~l~G~hn~~Na~~Aiaa~~~lg~~i~ 260 (429)
+ +..... .........++.+.. .. .....+.............++++|.||++|+++|++++..+|+ +
T Consensus 214 d-~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~G~hn~~NalaAia~~~~lGi--~ 285 (439)
T 2x5o_A 214 D-ALTMPI-----RGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGL--P 285 (439)
T ss_dssp C-GGGSCS-----CCCSSCCEEECSSSSSEEEEEETTEEEEEETTEEEEEGGGCSCCSHHHHHHHHHHHHHHHHTTC--C
T ss_pred H-HHHHHH-----HHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC--C
T ss_conf 4-889998-----7436744675024443320003661599835851222221155660557778779999998399--6
Q ss_pred HHHCCCCCCCCC-CCCCEEEEECCCCCCCCCCCCEEEEEC-CCCHHHHHHHHHHHHHHCCCCCCCEEEEE-CCCCCCCHH
Q ss_conf 110011222233-665303542287544457874599933-63215799888654331147777124311-346798989
Q gi|254780821|r 261 KECINAALQSVQ-WFGRLQKITEGPLLNKLPDHSEVWIDG-GHNPNAGLVVSKEISKLKGSSNKPFYLVI-GMVEGKKYG 337 (429)
Q Consensus 261 ~~~I~~gL~~~~-~pGR~e~i~~~~~~~~~~~~~~viiD~-AHNp~s~~~l~~~l~~l~~~~~~~i~~I~-G~~~dKd~~ 337 (429)
.+.|.++|++++ +|||||.+.. .++..+|.|+ ||||+|++++++.++.. .++.+++ |..++.++.
T Consensus 286 ~~~i~~~L~~f~gv~~R~e~~~~-------~~g~~~idD~~a~np~a~~~al~~~~~~-----~~~~~i~~g~~~~~~~~ 353 (439)
T 2x5o_A 286 RASSLKALTTFTGLPHRFEVVLE-------HNGVRWINDSKATNVGSTEAALNGLHVD-----GTLHLLLGGDGKSADFS 353 (439)
T ss_dssp HHHHHHHHHHCCCCTTSSEEEEE-------ETTEEEEECTTCCSHHHHHHHHTTCCCS-----SCEEEEEESBCTTCCCG
T ss_pred HHHHHHHHHHCCCCCCEEEEEEE-------ECCEEEEEECCCCCHHHHHHHHHHHHHC-----CCCEEEECCCCCCCCHH
T ss_conf 99999999757797442689995-------0998999953799989999999966644-----88669974788644789
Q ss_pred HHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEEE-C--CH
Q ss_conf 99998886388899984228899842127898999999985499789969989999999986035886799994-9--77
Q gi|254780821|r 338 RYLEAFVELSPIVLSVSLICRGRERQSISITPKVLMQEAKKLGFQAMACSSMIEALSRVRKINEELPPPLILIA-G--SL 414 (429)
Q Consensus 338 ~~l~~l~~~~d~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~eAi~~a~~~~~~~~~d~VLV~-G--S~ 414 (429)
++.+.+....+.++++ . .+.+.+.+ .....+..+++++||++.+.+.+ +++|+||.. | ||
T Consensus 354 ~l~~~~~~~~~~v~~~---G---------~~~~~i~~---~~~~~~~~~~~l~eav~~a~~~~--~~gDvVLlSP~~aSf 416 (439)
T 2x5o_A 354 PLARYLNGDNVRLYCF---G---------RDGAQLAA---LRPEVAEQTETMEQAMRLLAPRV--QPGDMVLLSPACASL 416 (439)
T ss_dssp GGGGGSCSSSEEEEEE---S---------TTHHHHHT---TSGGGEEECSSHHHHHHHHGGGC--CTTCEEEECCSSBST
T ss_pred HHHHHHHCCCCEEEEE---C---------CCHHHHHH---HCCCCEEECCCHHHHHHHHHHHC--CCCCEEEECCCCCCC
T ss_conf 9999985048899998---9---------89899985---37777177598999999999858--992999979744030
Q ss_pred ------HHHHHHHHH
Q ss_conf ------999999998
Q gi|254780821|r 415 ------YLAGEALRE 423 (429)
Q Consensus 415 ------ylvge~l~~ 423 (429)
.-=|+..++
T Consensus 417 d~f~~~~~RG~~F~~ 431 (439)
T 2x5o_A 417 DQFKNFEQRGNEFAR 431 (439)
T ss_dssp TTSSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
T ss_conf 232799999999999