RPSBLAST alignment of GI: 254780821 and protein with PDBid: 1e8c

>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.0A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 Length = 498

 Score =  123 bits (310), Expect = 6e-29
 Identities = 64/425 (15%), Positives = 122/425 (28%), Gaps = 62/425 (14%)

Query: 3   ADSLLKMGYLLEDL-GRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHL 61
           +    ++  L       P D L  ++ + GTNGK +      +  +  G    V  +   
Sbjct: 87  SQLNERLSALAGRFYHEPSDNLR-LVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGN 145

Query: 62  IRWNERFRLGVKGGRGRLVEDVELLDVFRRVRRVKSAQNLTIFELSIATALVLFSKYPAD 121
               +                                +N T   + +   L       A 
Sbjct: 146 GLLGKVI----------------------------PTENTTGSAVDVQHELAGLVDQGAT 177

Query: 122 CAIIEVGLGGSLDATNIIEKVAVSVITSISLDHEKILGNTVSAIAKDKSGIIKPGCPVVI 181
              +EV   G +       K A SV T++S DH    G  +      K  +         
Sbjct: 178 FCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHG-DMEHYEAAKWLLYSEHHCGQA 236

Query: 182 GHQVYDEVREILVSKAEKM-------GCPYNVYGDDFYA----FEKNKCLVYQDKISQTN 230
                DEV    ++K               N +G    A    +  +   +         
Sbjct: 237 IINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDG 296

Query: 231 LTVLGLVGEHQYINAATAICAVQMAGFTLEKECINAALQSVQWFGRLQKITEGPLLNKLP 290
                L+G     N   A+  +   G+ L  + +  A +     GR++  T        P
Sbjct: 297 EIESHLMGAFNVSNLLLALATLLALGYPLA-DLLKTAARLQPVCGRMEVFTA-------P 348

Query: 291 DHSEVWIDGGHNPNAGLVVSKEISKLKGSSNKPFYLVIGMVEGKKYGRYLEAFVELSPIV 350
               V +D  H P+A   + K +   +       + V G   G +          ++   
Sbjct: 349 GKPTVVVDYAHTPDA---LEKALQAARLHCAGKLWCVFGCG-GDRDKGKRPLMGAIAEEF 404

Query: 351 LSVSLICRGRERQSISITPKVLMQEAKKLGF---QAMACSSMIEALSRVRKINEELPPPL 407
             V+++     R   +  P+ ++ +          A       EA++      +     +
Sbjct: 405 ADVAVVTDDNPR---TEEPRAIINDILAGMLDAGHAKVMEGRAEAVTCAVMQAK--ENDV 459

Query: 408 ILIAG 412
           +L+AG
Sbjct: 460 VLVAG 464