RPSBLAST alignment of GI: 254780821 and protein with PDBid: 1gg4

>1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 Length = 452

 Score = 43.8 bits (102), Expect = 7e-05
 Identities = 46/322 (14%), Positives = 100/322 (31%), Gaps = 41/322 (12%)

Query: 121 DCAIIEVGL--GGSLDATNIIEKVAVSVITSISLDHEKILGNTVS-AIAKDKSGIIKPGC 177
           D A+IE+G    G +  T  + +   +++ +++  H +  G+    A AK +     P  
Sbjct: 153 DYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPEN 212

Query: 178 PVVIGHQVYDEVREILVSKAEKMGCPYNVYGDDF------YAFEKNKCLVYQDKISQTNL 231
            + I +   ++          +    ++    +            +         + +  
Sbjct: 213 GIAIMNADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVD 272

Query: 232 TVLGLVGEHQYINAATAICAVQMAGFTLEK-ECINAALQSVQWFGRLQKITEGPLLNKLP 290
            +L L G H   NA  A       G TL+  +   A L++V       ++ E        
Sbjct: 273 VLLPLPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQ------ 326

Query: 291 DHSEVWIDGGHNPNAGLVVSKEISKLKGSSNKPFYLVIGMVEGKKYGRYLEAFVELSPIV 350
               +  D  +     +  +  +  L         +V  M E           V++    
Sbjct: 327 ---LLLDDSYNANVGSMTAA--VQVLAEMPGYRVLVVGDMAEL--GAESEACHVQVGEAA 379

Query: 351 LSVS---LICRGRERQSISITPKVLMQEAKKLGFQAMACSSMIEALSRVRKINEELPPPL 407
            +     ++  G++                         +     ++R++ +  E     
Sbjct: 380 KAAGIDRVLSVGKQ-----------SHAISTASGVGEHFADKTALITRLKLLIAEQQVIT 428

Query: 408 ILIAGS----LYLAGEALRENG 425
           IL+ GS    +     AL+ENG
Sbjct: 429 ILVKGSRSAAMEEVVRALQENG 450