HHsearch alignment for GI: 254780822 and conserved domain: PRK09301
>PRK09301 circadian clock protein KaiB; Provisional.
Probab=91.13 E-value=0.55 Score=26.84 Aligned_cols=80 Identities=13% Similarity=0.220 Sum_probs=58.4
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCC-HH
Q ss_conf 9499998769970222134666654210-001233322672326577776231568879999799898588748999-89
Q gi|254780822|r 20 NPVVVDFWASWCRPCVKLSPIIDDIADE-LADKVKITKLDIEESSEISTRYQISSIPTLILFKDGKVIDRMMPGASS-QS 97 (107)
Q Consensus 20 ~~vlv~f~a~wC~~C~~~~p~~~~l~~~-~~~~i~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~g~~~-~~ 97 (107)
T Consensus 6 ~yvLrLYVaG~tp~S~~Ai~nl~~ice~~L~g~Y~LeVIDv~~~Pe~Ae~~~IlAtPTLvk~-~P~P~RriI-GDLSd~e 83 (103)
T PRK09301 6 TYILKLYVAGNTPNSMRALKTLKNILETEFKGVYALKVIDVLKNPQLAEEDKILATPTLAKI-LPPPVRRII-GDLSDRE 83 (103)
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCEEEECHHHHH-CCCCCEEEE-CCCCCHH
T ss_conf 18999997389978999999999999986599636999981269857726886784310020-698620575-0577478
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780822|r 98 DIIE 101 (107)
Q Consensus 98 ~l~~ 101 (107)
T Consensus 84 kVL~ 87 (103)
T PRK09301 84 KVLI 87 (103)
T ss_pred HHHH
T ss_conf 9998