HHsearch alignment for GI: 254780822 and conserved domain: PRK13728

>PRK13728 conjugal transfer protein TrbB; Provisional.
Probab=97.61  E-value=0.00019  Score=46.74  Aligned_cols=87  Identities=17%  Similarity=0.299  Sum_probs=61.7

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC----------CHHHHHH-HC--CCCCCEEEEEE-CCE
Q ss_conf             9949999876997022213466665421000123332267232----------6577776-23--15688799997-998
Q gi|254780822|r   19 SNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLDIEE----------SSEISTR-YQ--ISSIPTLILFK-DGK   84 (107)
Q Consensus        19 ~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd~d~----------~~~l~~~-~~--v~~~Pt~~~~~-~g~   84 (107)
T Consensus        69 ~dy~lV~F~rS~CPyChqFAP~Lk~~a~~~gi~V~~~SlDG~g~~~FP~~lPaTpei~~tfF~n~~~~tPatFLvNvnT~  148 (181)
T PRK13728         69 ADWKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALPAPPDVMQTFFPNIPVATPTTFLVNVNTL  148 (181)
T ss_pred             CCEEEEEEECCCCCHHHHHCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCC
T ss_conf             34189999738892577658899999998597179985369888788867779879999974789878861699733741


Q ss_pred             EEEEEECCCCCHHHHHHHHHH
Q ss_conf             985887489998999999984
Q gi|254780822|r   85 VIDRMMPGASSQSDIIEWILS  105 (107)
Q Consensus        85 ~~~~~~~g~~~~~~l~~~i~~  105 (107)
T Consensus       149 ~ayPv~qG~~~~~~l~~R~d~  169 (181)
T PRK13728        149 EALPLLQGATDAAGFMARMDT  169 (181)
T ss_pred             CEECCCCCCCCHHHHHHHHHH
T ss_conf             100111165578999999999