HHsearch alignment for GI: 254780822 and conserved domain: TIGR00385
>TIGR00385 dsbE periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily; InterPro: IPR004799 Periplasmic protein thiol:disulphide oxidoreductase is involved in the biogenesis of c-type cytochromes as well as in disulphide bond formation in some periplasmic proteins. This group defines the DsbE subfamily.; GO: 0015036 disulfide oxidoreductase activity, 0017004 cytochrome complex assembly, 0030288 outer membrane-bounded periplasmic space.
Probab=99.22 E-value=1.2e-11 Score=88.18 Aligned_cols=90 Identities=22% Similarity=0.591 Sum_probs=70.5
Q ss_pred HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-----------------------CHHHHH
Q ss_conf 999998489949999876997022213466665421000123332267232-----------------------657777
Q gi|254780822|r 11 FDSEVLECSNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLDIEE-----------------------SSEIST 67 (107)
Q Consensus 11 f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd~d~-----------------------~~~l~~ 67 (107)
T Consensus 56 ~~~~~~~qG~~~LlNVWAsWCp~CraEHp~L~eLak~--Grl~ivG~dYKD~~~~Al~~LkelGNPy~~~~~D~~G~~gl 133 (175)
T TIGR00385 56 YTADIFRQGKPVLLNVWASWCPPCRAEHPYLNELAKE--GRLPIVGVDYKDQSQNALKFLKELGNPYQLILADPKGKLGL 133 (175)
T ss_pred CCHHHHHCCCEEEEEEEECCCCCCHHCCHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCEEE
T ss_conf 3644530896069988403688831000578999753--97307886347884578888764489066888789984653
Q ss_pred HHCCCCCCEEEEE-ECCEEEEEEECCCCCHHHHHHHH
Q ss_conf 6231568879999-79989858874899989999999
Q gi|254780822|r 68 RYQISSIPTLILF-KDGKVIDRMMPGASSQSDIIEWI 103 (107)
Q Consensus 68 ~~~v~~~Pt~~~~-~~g~~~~~~~~g~~~~~~l~~~i 103 (107)
T Consensus 134 DlGV~GaPETflvdg~G~I~YR-haG~l~~~~w~~~l 169 (175)
T TIGR00385 134 DLGVYGAPETFLVDGNGVILYR-HAGPLNKEVWTEEL 169 (175)
T ss_pred ECCCCCCCCCEEECCCCEEEEE-ECCCCCCHHHHHHC
T ss_conf 2266889854786798658777-43788601122212