HHsearch alignment for GI: 254780822 and conserved domain: cd02956
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=99.94 E-value=1.4e-26 Score=174.27 Aligned_cols=95 Identities=26% Similarity=0.602 Sum_probs=89.0
Q ss_pred HHHHHHHHHC-CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEE
Q ss_conf 7799999848-994999987699702221346666542100012333226723265777762315688799997998985
Q gi|254780822|r 9 KSFDSEVLEC-SNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLDIEESSEISTRYQISSIPTLILFKDGKVID 87 (107)
Q Consensus 9 ~~f~~~v~~~-~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~g~~~~ 87 (107)
T Consensus 1 enF~~~v~~s~~~PVlv~F~A~wC~~C~~~~p~l~~~a~~~~~~~~~~~vd~d~~~~la~~~~V~~~Pt~~~f~~G~~v~ 80 (96)
T cd02956 1 QNFQQVLQESTQVPVVVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDAQPQIAQQFGVQALPTVYLFAAGQPVD 80 (96)
T ss_pred CCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCCCCCEEEEEECCEEEE
T ss_conf 98689999759980999998899976899899999999855652999998033465468767876168388899999945
Q ss_pred EEECCCCCHHHHHHHHH
Q ss_conf 88748999899999998
Q gi|254780822|r 88 RMMPGASSQSDIIEWIL 104 (107)
Q Consensus 88 ~~~~g~~~~~~l~~~i~ 104 (107)
T Consensus 81 ~~-~G~~~~~~l~~~le 96 (96)
T cd02956 81 GF-QGAQPEEQLRQMLD 96 (96)
T ss_pred EE-ECCCCHHHHHHHHC
T ss_conf 77-18999999999769