HHsearch alignment for GI: 254780822 and conserved domain: cd02960
>cd02960 AGR Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of the cement gland and the induction of forebrain fate. The human homologs, hAG-2 and hAG-3, are secreted proteins associated with estrogen-positive breast tumors. Yeast two-hybrid studies identified the metastasis-associated C4.4a protein and dystroglycan as binding partners, indicating possible roles in the development and progression of breast cancer. hAG-2 has also been implicated in prostate cancer. Its gene was cloned as an androgen-inducible gene and it was shown to be overexpressed in prostate cancer cells at the mRNA and protein levels. AGR proteins contain one conserved cysteine corresponding to the first cysteine in the CXXC motif of TRX. They show high sequence similarity to ERp19.
Probab=97.89 E-value=1.3e-05 Score=53.39 Aligned_cols=69 Identities=13% Similarity=0.200 Sum_probs=47.5
Q ss_pred HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCCCHHHHHHHCCC--CCCEEEEEE-CCEE
Q ss_conf 984899499998769970222134666654210--0012333226723265777762315--688799997-9989
Q gi|254780822|r 15 VLECSNPVVVDFWASWCRPCVKLSPIIDDIADE--LADKVKITKLDIEESSEISTRYQIS--SIPTLILFK-DGKV 85 (107)
Q Consensus 15 v~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~--~~~~i~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~-~g~~ 85 (107)
T Consensus 19 ak~s~KPlMvIiH~~~C~~c~aLKk~Fa~s~eI~~la-~e~FVMvNl~~E~~d-~~~~pDG~YvPRIlFlDp~g~V 92 (130)
T cd02960 19 AKKSNKPLMVIHHLEDCPHSQALKKAFAEHKEIQKLA-QEDFIMLNLVHETTD-KNLSPDGQYVPRIMFVDPSLTV 92 (130)
T ss_pred HHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHH-HCCEEEEECCCCCCC-CCCCCCCCEECCEEEECCCCCC
T ss_conf 9972999799986023867899999860579899873-557689965657874-3449998636438998999858