HHsearch alignment for GI: 254780822 and conserved domain: cd02962
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=99.78 E-value=4.6e-19 Score=130.95 Aligned_cols=88 Identities=24% Similarity=0.574 Sum_probs=77.7
Q ss_pred EEEECHHHHHHHHHHC-CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHCCCC------C
Q ss_conf 1775767799999848-99499998769970222134666654210001-23332267232657777623156------8
Q gi|254780822|r 3 ALKVDTKSFDSEVLEC-SNPVVVDFWASWCRPCVKLSPIIDDIADELAD-KVKITKLDIEESSEISTRYQISS------I 74 (107)
Q Consensus 3 ~i~i~~~~f~~~v~~~-~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-~i~~~~vd~d~~~~l~~~~~v~~------~ 74 (107)
T Consensus 30 i~~~~~~~le~~L~~~~~~~WLV~F~A~W~~~C~~~apifaelS~~y~~~~lkFgkvDv~r~p~vA~ky~I~~s~~s~ql 109 (152)
T cd02962 30 IKYFTPKTLEEELERDKRVTWLVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRFPNVAEKFRVSTSPLSKQL 109 (152)
T ss_pred EEEECCCCHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCC
T ss_conf 45637420898962499649999992588878887789999999996537866999876637406988286753233658
Q ss_pred CEEEEEECCEEEEEEE
Q ss_conf 8799997998985887
Q gi|254780822|r 75 PTLILFKDGKVIDRMM 90 (107)
Q Consensus 75 Pt~~~~~~g~~~~~~~ 90 (107)
T Consensus 110 PT~iLF~~G~Ev~R~P 125 (152)
T cd02962 110 PTIILFQGGKEVARRP 125 (152)
T ss_pred CEEEEEECCEEEEECC
T ss_conf 7599974889945637