HHsearch alignment for GI: 254780822 and conserved domain: cd03010
>cd03010 TlpA_like_DsbE TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c maturation (Ccm) factor with a redox active CXXC motif. Assembly of cytochrome c requires the ligation of heme to reduced thiols of the apocytochrome. In bacteria, this assembly occurs in the periplasm. The reductase activity of DsbE in the oxidizing environment of the periplasm is crucial in the maturation of cytochrome c.
Probab=99.48 E-value=7.7e-14 Score=100.86 Aligned_cols=80 Identities=21% Similarity=0.507 Sum_probs=64.5
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-----------------------CHHHHHHHCCCCC
Q ss_conf 89949999876997022213466665421000123332267232-----------------------6577776231568
Q gi|254780822|r 18 CSNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLDIEE-----------------------SSEISTRYQISSI 74 (107)
Q Consensus 18 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd~d~-----------------------~~~l~~~~~v~~~ 74 (107)
T Consensus 24 kGk~vvl~FWAtWC~pC~~e~P~l~~l~~~~--~~~vv~v~~~d~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~v~~~ 101 (127)
T cd03010 24 KGKPYLLNVWASWCAPCREEHPVLMALARQG--RVPIYGINYKDNPENALAWLARHGNPYAAVGFDPDGRVGIDLGVYGV 101 (127)
T ss_pred CCCEEEEEEECCCCHHHHHHCCHHHHHHHCC--CEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCC
T ss_conf 9998999999895866888681078884258--35899863478999999999983998644775588632230785547
Q ss_pred CEEEEE-ECCEEEEEEECCCCCHHHHH
Q ss_conf 879999-79989858874899989999
Q gi|254780822|r 75 PTLILF-KDGKVIDRMMPGASSQSDII 100 (107)
Q Consensus 75 Pt~~~~-~~g~~~~~~~~g~~~~~~l~ 100 (107)
T Consensus 102 Ptt~liD~~G~I~~~~-~G~i~~e~le 127 (127)
T cd03010 102 PETFLIDGDGIIRYKH-VGPLTPEVWE 127 (127)
T ss_pred CCEEEEECCCEEEEEE-ECCCCHHHCC
T ss_conf 8199991999799999-8489969939