HHsearch alignment for GI: 254780822 and conserved domain: cd03011
>cd03011 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.
Probab=99.48 E-value=1.3e-13 Score=99.49 Aligned_cols=82 Identities=27% Similarity=0.559 Sum_probs=64.9
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC---------------------CCCCHHHHHHHCCCCCCE
Q ss_conf 89949999876997022213466665421000123332267---------------------232657777623156887
Q gi|254780822|r 18 CSNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLD---------------------IEESSEISTRYQISSIPT 76 (107)
Q Consensus 18 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd---------------------~d~~~~l~~~~~v~~~Pt 76 (107)
T Consensus 19 ~Gk~vvl~FWAtWC~pC~~e~P~l~~l~~~~~--~v~v~~~~~~~~~v~~f~~~~~~~fp~~~D~~~~~~~~y~v~~~Pt 96 (123)
T cd03011 19 SGKPVLVYFWATWCPVCRFTSPTVNQLAADYP--VVSVALRSGDDGAVARFMQKKGYGFPVINDPDGVISARWGVSVTPA 96 (123)
T ss_pred CCCEEEEEEECCCCCCHHHHCHHHHHHHHHCC--EEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCCCE
T ss_conf 99989999993878136563833888873387--8878860386888887765118873289889976265479771677
Q ss_pred EEEEECCEEEEEEECCCCCHHHHHHH
Q ss_conf 99997998985887489998999999
Q gi|254780822|r 77 LILFKDGKVIDRMMPGASSQSDIIEW 102 (107)
Q Consensus 77 ~~~~~~g~~~~~~~~g~~~~~~l~~~ 102 (107)
T Consensus 97 ~~liD~~GiV~~~-~G~~~~~~~~~r 121 (123)
T cd03011 97 IVIVDPGGIVFVT-TGVTSEWGLRLR 121 (123)
T ss_pred EEEEECCCEEEEE-ECCCCHHHHHHH
T ss_conf 9999199989999-757997999984