HHsearch alignment for GI: 254780822 and conserved domain: pfam07912
>pfam07912 ERp29_N ERp29, N-terminal domain. ERp29 is a ubiquitously expressed endoplasmic reticulum protein, and is involved in the processes of protein maturation and protein secretion in this organelle. The protein exists as a homodimer, with each monomer being composed of two domains. The N-terminal domain featured in this family is organized into a thioredoxin-like fold that resembles the a domain of human protein disulphide isomerase (PDI). However, this domain lacks the C-X-X-C motif required for the redox function of PDI; it is therefore thought that ERp29's function is similar to the chaperone function of PDI. The N-terminal domain is exclusively responsible for the homodimerization of the protein, without covalent linkages or additional contacts with other domains.
Probab=97.90 E-value=7.6e-05 Score=49.04 Aligned_cols=101 Identities=20% Similarity=0.320 Sum_probs=74.9
Q ss_pred EEEECHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH-CC--CCCCCCCCCC-----CCCHHHHHHHCCC--
Q ss_conf 177576779999984899499998769970222134666654210-00--1233322672-----3265777762315--
Q gi|254780822|r 3 ALKVDTKSFDSEVLECSNPVVVDFWASWCRPCVKLSPIIDDIADE-LA--DKVKITKLDI-----EESSEISTRYQIS-- 72 (107)
Q Consensus 3 ~i~i~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~-~~--~~i~~~~vd~-----d~~~~l~~~~~v~-- 72 (107)
T Consensus 6 cV~LD~~tFdK-vv~~f~~~lVKFD--vayPYGeKHdaF~~~A~ea~~~~~dlLvAeVGikDYGekeN~~L~~ry~v~~e 82 (126)
T pfam07912 6 CVDLDTVTFYK-VIPKFKYSLVKFD--TAYPYGEKHEAFTRLAKENSASTEELLVAEVGIKDYGEKLNMELGERYKLDKE 82 (126)
T ss_pred EEECCHHHHHH-HHCCCCEEEEEEE--CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
T ss_conf 68622110555-1213761799972--34777622799999999872466542899956664673667999987198845
Q ss_pred CCCEEEEEECCEEEEEEE--CCCCCHHHHHHHHHHC
Q ss_conf 688799997998985887--4899989999999841
Q gi|254780822|r 73 SIPTLILFKDGKVIDRMM--PGASSQSDIIEWILSR 106 (107)
Q Consensus 73 ~~Pt~~~~~~g~~~~~~~--~g~~~~~~l~~~i~~~ 106 (107)
T Consensus 83 ~fP~i~LF~~~~~~pv~~~~~~d~t~dnl~~fvk~~ 118 (126)
T pfam07912 83 SYPVIYLFRGDLENPVLYPSNGAVTVDALQRFLKGQ 118 (126)
T ss_pred CCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHC
T ss_conf 497899953899785436766870699999999839