HHsearch alignment for GI: 254780823 and conserved domain: COG0210
>COG0210 UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].
Probab=99.97 E-value=2.7e-25 Score=182.32 Aligned_cols=606 Identities=14% Similarity=0.072 Sum_probs=330.0
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCEECCEEEEHHHHH
Q ss_conf 84898389889379999999711210112367898133222067627968999999999851188865140331257765
Q gi|254780823|r 6 PNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQELRSEFIEITGKKSTILPIIKSLGDVV 85 (1040)
Q Consensus 6 ~~v~~~~~~~~fl~~~a~~l~~~~~~~~~~~~~~~p~~L~~v~vl~ptrraa~~Lr~~l~~~~~~~~~~~P~i~t~~~~~ 85 (1040)
T Consensus 17 p~lV~AGaGsGKT~vlt~Ri-a~li----~~~~v~p~---~Il~vTFTnkAA~em~~Rl~~~~~~~~~~~~~v~TfHs~~ 88 (655)
T COG0210 17 PLLVLAGAGSGKTRVLTERI-AYLI----AAGGVDPE---QILAITFTNKAAAEMRERLLKLLGLPAAEGLTVGTFHSFA 88 (655)
T ss_pred CEEEEECCCCCCHHHHHHHH-HHHH----HCCCCCHH---HEEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH
T ss_conf 86999579986189999999-9998----73895757---7177896769999999999987385544653999834677
Q ss_pred HHHHHCCCCCCC-CC-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 655404543346-77-8888818999999999999986310000001223211135697889998999999999999759
Q gi|254780823|r 86 EEKFTADLLLSY-NL-NPPVSNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEE 163 (1040)
Q Consensus 86 ~~~~~~~~~~~~-~~-~~~~~~~~r~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~L~~l~d~~~~~~ 163 (1040)
T Consensus 89 ~~~lr~~~~~~~~~~~f~i~d~~d~~~~~~~~~~~~--~~~~----~--------------~~~~~~~~~~~i~~~k~~~ 148 (655)
T COG0210 89 LRILRRHGERLGLNANFTILDSDDQLALIKELLRRE--LNLD----D--------------KELLPREALRYISEAKNAL 148 (655)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH--CCCC----C--------------CCHHHHHHHHHHHHHHHCC
T ss_conf 999999788548666871105200789999998654--1664----1--------------1003899999889998726
Q ss_pred CCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-----HCCCCCEEEEEECCCC
Q ss_conf 99789874002202079999999999999999997532488898999999998744344-----2276880999834566
Q gi|254780823|r 164 KKWEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAEHL-----MKGTKGPIIIAGSTGS 238 (1040)
Q Consensus 164 ~~~~~L~~l~~~~~~~~w~~~~~fL~~~~~~~~~~l~~~g~~d~~~~~~~~~~~~~~~~-----~~~~~~~i~v~g~~~~ 238 (1040)
T Consensus 149 ~~~~~~~~~~~~~~~~~~---~~~~~~~y~~Y~~~~~~~~~~df~dll~~~~~ll~~~~~v~~~~~~rf~~iLvDE~QDt 225 (655)
T COG0210 149 LSPLEASALLLAAIKSEA---EKKLAELYEEYQELLRLNNALDFDDLLLLALRLLEENPEVLEALQARFRYILVDEFQDT 225 (655)
T ss_pred CCHHHHHHHHHCCCCCHH---HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCC
T ss_conf 782420155540134268---99999999999999876585368999999998723484789999956898987877785
Q ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCC
Q ss_conf 16799999998614896899824863210788864334201233333444676368999999762999666025776664
Q gi|254780823|r 239 IPATARLMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKSTNITSSNTTYSTHPQYSLAKLLDFLDIKREDVKRLGNVSN 318 (1040)
Q Consensus 239 ~~~~~~ll~al~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 318 (1040)
T Consensus 226 n~~Q~~ll~~la~~--~~~l~~VGD~dQsIY~frGA~~~ni~~f~~df~~-------------------~~~i~Le~nyR 284 (655)
T COG0210 226 NPLQYELLKLLAGN--AANLFVVGDDDQSIYGFRGADPENILDFEKDFPA-------------------AKVIKLEQNYR 284 (655)
T ss_pred CHHHHHHHHHHHCC--CCCEEEECCCCCCEEEECCCCCHHHHHHHHHCCC-------------------CCEEECCCCCC
T ss_conf 18799999998448--7757998589873676778783678978763565-------------------54676042448
Q ss_pred CCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHC---CCEEEEEECC
Q ss_conf 5367777544420111221000000123567653213378159955998999999999999986422---9849998026
Q gi|254780823|r 319 EMYGRSMVISKSFLPPDTSDMRNTDILENKIPNIQKCFSDVALIEADNEREEAISIAIALRMSLDEN---KKKSALITAD 395 (1040)
Q Consensus 319 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~Ea~~ia~~lr~~~~~~---~~~~avv~~d 395 (1040)
T Consensus 285 St~~Il~~An~~i~~n------~~r~~k~l~~~~~~~~~~~~~~~~~~~~~ea~~i~~~I~~l~~~~~~~~~d~aiL~R~ 358 (655)
T COG0210 285 STPNILAAANKVIANN------KKRQAKTLRTEVEGSGEKVVLLLANDEEDEARWIASEIDALIEIGKVNYSDIAILYRT 358 (655)
T ss_pred CHHHHHHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf 8899999999998718------6523342110235677885698678817789999999999998268880307888615
Q ss_pred CCHHHHHHHHHHHHCCCCCCC-CCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 411357888435513777665-6900352889899999999983799978999986296545667938999999973223
Q gi|254780823|r 396 RNLARRVKLELTRFGINIDIS-AGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELV 474 (1040)
Q Consensus 396 ~~~~~~v~~~L~~~gipv~~s-~g~pL~~~p~v~~l~~ll~~~~~~~~~~~l~~LL~sPl~~~~~~~~~~~~~~~~~~~~ 474 (1040)
T Consensus 359 n~~s~~~e~~l~~~~ipy~i~~gg~~f~~r~eikd~l~~l~~~~n~~d~~~~~r~~~~~~r~ig~~~~~~~~~~~~~~~~ 438 (655)
T COG0210 359 NAQSRLIEEALRAAGIPYRIVIGGTSFFERKEIKDLLAYLRLVLNPDDDAAFLRILNLPKRGIGDATLKKLLELARERNL 438 (655)
T ss_pred CHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 66778899998662897477537076651699999999973234767578899985133443206689999999865121
Q ss_pred HHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 21045577781117888752201144443455201015534325799999998999999875011002210237889999
Q gi|254780823|r 475 ALRGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVTYKTNKNSTCGNLSISDWT 554 (1040)
Q Consensus 475 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~l~~~~~~~~~~~~~~~l~~~~ 554 (1040)
T Consensus 439 ~~--------~~~l~~~~~~---------------~~l~~~~~~~~~~f~----~~~~~~~~~~~~-------~~~~~~~ 484 (655)
T COG0210 439 SL--------LEALKALLSF---------------IRLSERGLALLLDFA----ELIEELREAILL-------STALELI 484 (655)
T ss_pred HH--------HHHHHHHHHH---------------CCCCHHHHHHHHHHH----HHHHHHHHHHCC-------CCHHHHH
T ss_conf 37--------8988987741---------------435477898999999----999999873022-------3399999
Q ss_pred HHHHH---HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
Q ss_conf 99999---997236763211145665777999999998664213766447788999999862244335667787737980
Q gi|254780823|r 555 KLTVT---CLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGSCIKANAIEWIDIITRLIDGETVKPKIEKSSTLFIL 631 (1040)
Q Consensus 555 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~v~ 631 (1040)
T Consensus 485 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~nl~el~~~~~~~~~~----~~~l~~fl~~~~~~~~~~~~~~~~-~~~~V~lm 558 (655)
T COG0210 485 RELLEALGYLEALLEAG-SLVAAEDRLENLEELLDVLKRYAEP----RESLRAFLSELSLLANDEEEEEPD-EDGQVNLM 558 (655)
T ss_pred HHHHHHCCHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHCCHHHHCCCC-CCCCEEEE
T ss_conf 99987505689998633-5014577887899999999874124----507999999988611033310224-57846997
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-EEEEEEECC----CC
Q ss_conf 3433356658637852863113456666676489678856489996678889999999985598-599992046----77
Q gi|254780823|r 632 GTLESRLLNFDTLILGGLNEGVWPKNTAKNPFLSRVMQSDLNLKTAEKYIGQAAHDFEMANGTR-HLIYTRSLR----EN 706 (1040)
Q Consensus 632 ~~~~a~~~~~~~v~v~gl~e~~~P~~~~~~~~l~~~~r~~l~l~~~e~~~~~~~~~~~~~~~a~-~v~lt~~~~----~~ 706 (1040)
T Consensus 559 T~H~aKGlEf~~Vfl~g~~eg~~P~~~~------------~~~~~~-~~eEERRL~YVaiTRA~~~L~~t~~~~~~~~~~ 625 (655)
T COG0210 559 TIHAAKGLEFPYVFLVGLEEGLFPADRS------------LDEGDE-PLEEERRLLYVAITRAKKKLYLTYAASRKLWGK 625 (655)
T ss_pred EHHHHCCCCCCEEEEECCCCCCCCCCHH------------CCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 2013137768756785553688987000------------006787-765588899998788876553323655553265
Q ss_pred CCCCCCCHHHHHHHHC
Q ss_conf 7665665378887731
Q gi|254780823|r 707 NIPTIASRWLQRLLVL 722 (1040)
Q Consensus 707 ~~~~~ps~~l~~l~~~ 722 (1040)
T Consensus 626 ~~~~~~srFi~e~~~~ 641 (655)
T COG0210 626 EVEEEPSRFVSELPAE 641 (655)
T ss_pred CCCCCCCHHHHHHHHH
T ss_conf 2344735787750488