HHsearch alignment for GI: 254780823 and conserved domain: COG3893
>COG3893 Inactivated superfamily I helicase [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=556.02 Aligned_cols=693 Identities=41% Similarity=0.697 Sum_probs=615.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCEECCEEEEHHHHH
Q ss_conf 84898389889379999999711210112367898133222067627968999999999851188865140331257765
Q gi|254780823|r 6 PNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQELRSEFIEITGKKSTILPIIKSLGDVV 85 (1040)
Q Consensus 6 ~~v~~~~~~~~fl~~~a~~l~~~~~~~~~~~~~~~p~~L~~v~vl~ptrraa~~Lr~~l~~~~~~~~~~~P~i~t~~~~~ 85 (1040)
T Consensus 1 ~r~~sip~g~pFl~~~A~~l~~g~l~~~~~-~p~~plal~~~ti~Vpt--saRaLr~~fvd~~~gr-alLP~i~~LG~~f 76 (697)
T COG3893 1 MRVFSIPPGPPFLPTLAEALLNGRLTPGFR-MPLDPLALASATIYVPT--SARALRHFFVDLGGGR-ALLPRIRPLGEAF 76 (697)
T ss_pred CCEEECCCCCCCHHHHHHHHHCCCCCCCCC-CCCCCEECCCCEEECCC--HHHHHHHHHHHHCCCC-CCCCHHHHCCHHH
T ss_conf 960425999853489999996266565667-99985113551365225--2889999999705751-0141465437243
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 65540454334677888881899999999999998631000000122321113569788999899999999999975999
Q gi|254780823|r 86 EEKFTADLLLSYNLNPPVSNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEEKK 165 (1040)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~L~~l~d~~~~~~~~ 165 (1040)
T Consensus 77 ---fd~~~~~~l~lap~iss~~rlilla~li~aw~~~lp~~v~al~-~~~~~~p~s~a~ai~lar~ls~l~d~~dte~~~ 152 (697)
T COG3893 77 ---FDAEPAAYLDLAPPISSRERLILLARLILAWRDSLPKHVLALF-QDELFFPASTADAIWLARNLSELFDLFDTESSE 152 (697)
T ss_pred ---HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---1487422246898876188999999999999865268888753-341005563788999998899999998775320
Q ss_pred HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCCHHHHH
Q ss_conf 78987400220207999999999999999999753248889899999999874434422-76880999834566167999
Q gi|254780823|r 166 WEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAEHLMK-GTKGPIIIAGSTGSIPATAR 244 (1040)
Q Consensus 166 ~~~L~~l~~~~~~~~w~~~~~fL~~~~~~~~~~l~~~g~~d~~~~~~~~~~~~~~~~~~-~~~~~i~v~g~~~~~~~~~~ 244 (1040)
T Consensus 153 ~~kld~L~~~d~a~~wq~tl~fL~~v~~~w~~~L~e~~~~~~~~~r~~~~rae~~r~~~~p~~gpvI~agsTg--PatAd 230 (697)
T COG3893 153 WDKLDDLATGDLAAWWQVTLEFLEIVYDAWPKRLEELGRSNPAAHRNALFRAEAMRLKNNPPTGPVIAAGSTG--PATAD 230 (697)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC--CCHHH
T ss_conf 5666315652079999999999999999999999861677721112367888998776389877777506898--31678
Q ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHH
Q ss_conf 99998614896899824863210788864334201233333444676368999999762999666025776664536777
Q gi|254780823|r 245 LMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKSTNITSSNTTYSTHPQYSLAKLLDFLDIKREDVKRLGNVSNEMYGRS 324 (1040)
Q Consensus 245 ll~al~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (1040)
T Consensus 231 Ll~~~~alp~g~vvlpGlD------~Wq~~--------------~~hpq~g~~~ll---G~~R~~v~~~~~--------- 278 (697)
T COG3893 231 LLAVIAALPQGAVVLPGLD------EWQAI--------------EGHPQYGFHSLL---GAERQLLLEIAE--------- 278 (697)
T ss_pred HHHHHHHCCCCCEECCCHH------HHHHH--------------CCCCHHHHHHHH---HHHHHHHHHHHH---------
T ss_conf 9999985468852056547------77764--------------168456789998---888999999975---------
Q ss_pred HHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
Q ss_conf 75444201112210000001235676532133781599559989999999999999864229849998026411357888
Q gi|254780823|r 325 MVISKSFLPPDTSDMRNTDILENKIPNIQKCFSDVALIEADNEREEAISIAIALRMSLDENKKKSALITADRNLARRVKL 404 (1040)
Q Consensus 325 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~Ea~~ia~~lr~~~~~~~~~~avv~~d~~~~~~v~~ 404 (1040)
T Consensus 279 --~~eaL~Pa~~t~~w~~~~~~-----~~e~la~~~lieaa~e~dea~aiA~alr~aLe~~-~~aALVt~Dr~lARRV~~ 350 (697)
T COG3893 279 --ADEALRPAELTASWDKYNRG-----FLEALAFVTLIEAANERDEAYAIALALREALEAP-RTAALVTPDRNLARRVAT 350 (697)
T ss_pred --HHHHCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHHHH
T ss_conf --14311515667668875245-----8887525469886531346799999999998483-300001674378999999
Q ss_pred HHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 43551377766569003528898999999999837999789999862965456679389999999732232104557778
Q gi|254780823|r 405 ELTRFGINIDISAGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELVALRGNKNSYD 484 (1040)
Q Consensus 405 ~L~~~gipv~~s~g~pL~~~p~v~~l~~ll~~~~~~~~~~~l~~LL~sPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1040)
T Consensus 351 ~L~R~gv~adds~G~pLs~t~~aal~~~~ie~v~rpgDPv~Ll~llKhPl~~fg~e~~~~~~aa~~LEl~alrg~~~s~~ 430 (697)
T COG3893 351 ELARFGVEADDSAGTPLSATPQAALLMLLIEAVLRPGDPVALLALLKHPLARFGLEFLDLRDAANVLELAALRGGKVSPG 430 (697)
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHCCHHHHHHHHHHCCCCCCCC
T ss_conf 99870877665568754322777999999999807997698999970941204771232107577788998607888831
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
Q ss_conf 11178887522011444434552010155343257999999989999998750110022102378899999999999723
Q gi|254780823|r 485 IMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVTYKTNKNSTCGNLSISDWTKLTVTCLQNV 564 (1040)
Q Consensus 485 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 564 (1040)
T Consensus 431 ~~~L~~lle~rl~~~~d~~~~p~~~~~~~~~~i~lA~~L~~~i~~A~~pl~~~~-----~~~~~~l~~~a~~t~~ale~l 505 (697)
T COG3893 431 YGELPALLEARLLGTSDDDLPPAWRAGLDPDNIALARLLLQRISEAKAPLGAGH-----FEAIADLLALALDTVRALENL 505 (697)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCH-----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 667999999985124666678520203694247999999999886435632322-----777763999999999999862
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEE
Q ss_conf 67632111456657779999999986642137664477889999998622443356677877379803433356658637
Q gi|254780823|r 565 CLDEHRKLPNLWFEEEGKTLSSLFSKIIETGSCIKANAIEWIDIITRLIDGETVKPKIEKSSTLFILGTLESRLLNFDTL 644 (1040)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~v~~~~~a~~~~~~~v 644 (1040)
T Consensus 506 ~~dd~g~l~~lw~~eage~L~~l~~gl~~~~a~ls--~~ew~diLd~L~~ge~vkp~~~~hprv~I~gaLEaRl~~~D~V 583 (697)
T COG3893 506 AIDDEGYLLALWLGEAGEKLAALLRGLIEAGAQLS--APEWPDILDALVAGETVKPAPGTHPRVRIMGALEARLQRFDGV 583 (697)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHCCCCEE
T ss_conf 56621039999875055799999999986146567--3057899998617762367888887168831046656003528
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH-HHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHCC
Q ss_conf 8528631134566666764896788564899966788899999-999855985999920467776656653788877314
Q gi|254780823|r 645 ILGGLNEGVWPKNTAKNPFLSRVMQSDLNLKTAEKYIGQAAHD-FEMANGTRHLIYTRSLRENNIPTIASRWLQRLLVLG 723 (1040)
Q Consensus 645 ~v~gl~e~~~P~~~~~~~~l~~~~r~~l~l~~~e~~~~~~~~~-~~~~~~a~~v~lt~~~~~~~~~~~ps~~l~~l~~~~ 723 (1040)
T Consensus 584 Vi~glNEg~wP~~~~nd~FlSr~mr~~lgL~pperR~glqAhd~fqma~na~eVvLt~~~r~g~ap~v~SrwLeRL~~l~ 663 (697)
T COG3893 584 VIVGLNEGVWPSKTPNDLFLSRPMRKSLGLPPPERRIGLQAHDYFQMAKNAPEVVLTRSERSGEAPAVSSRWLERLLTLL 663 (697)
T ss_pred EEECCCCCCCCCCCCCCHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 99557756488999651233458897459989678754666489999659981798632015898604568999999985
Q ss_pred CCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 73100001136532234787521012343454
Q gi|254780823|r 724 GTDFFDNLKKRGQCYLDWTRKLDYTTKQPHYK 755 (1040)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 755 (1040)
T Consensus 664 ~e~~~~~~r~~g~~~~~w~~~~D~~~~~~~~~ 695 (697)
T COG3893 664 GEAGTEQLRRRGDALLHWSRLLDEGEPQAPVP 695 (697)
T ss_pred HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf 03467777512087756222002478877778