HHsearch alignment for GI: 254780823 and conserved domain: PRK10919

>PRK10919 ATP-dependent DNA helicase Rep; Provisional.
Probab=100.00  E-value=7.3e-36  Score=251.65  Aligned_cols=601  Identities=12%  Similarity=0.061  Sum_probs=331.1

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCEECCEEEEHHH
Q ss_conf             88848983898893799999997112101123678981332220676279689999999998511888651403312577
Q gi|254780823|r    4 KKPNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQELRSEFIEITGKKSTILPIIKSLGD   83 (1040)
Q Consensus         4 ~~~~v~~~~~~~~fl~~~a~~l~~~~~~~~~~~~~~~p~~L~~v~vl~ptrraa~~Lr~~l~~~~~~~~~~~P~i~t~~~   83 (1040)
T Consensus        15 ~gp~lVlAGaGSGKT~tLt~-Ria~Li-~~---~~v~P~---~ILalTFT~kAA~Emk~Rl~~~lg~~~~~~~~i~TFHS   86 (672)
T PRK10919         15 TGPCLVLAGAGSGKTRVITN-KIAHLI-RG---CGYQAR---HIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHT   86 (672)
T ss_pred             CCCEEEEECCCHHHHHHHHH-HHHHHH-HC---CCCCCC---CEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEECHHH
T ss_conf             99989997385587999999-999998-66---898933---38544217999999999999771832137867884899


Q ss_pred             HHHHHHHCCCCCC-CCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6565540454334-677888-88189999999999999863100000012232111356978899989999999999997
Q gi|254780823|r   84 VVEEKFTADLLLS-YNLNPP-VSNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIET  161 (1040)
Q Consensus        84 ~~~~~~~~~~~~~-~~~~~~-~~~~~r~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~L~~l~d~~~~  161 (1040)
T Consensus        87 ~~~~iLr~~~~~lg~~~~f~i~d~~d~~~~~k~~~~~~~~~~----------------------~~~~~~~~~~i~~~k~  144 (672)
T PRK10919         87 LGLDIIKREYAALGMKSNFSLFDDTDQLALLKELTEGLIEDD----------------------KVLLQQLISTISNWKN  144 (672)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCC----------------------HHHHHHHHHHHHHHHH
T ss_conf             999999998998289999836169999999999998732023----------------------4789999999999987


Q ss_pred             CCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-----HCCCCCEEEEEECC
Q ss_conf             5999789874002202079999999999999999997532488898999999998744344-----22768809998345
Q gi|254780823|r  162 EEKKWEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAEHL-----MKGTKGPIIIAGST  236 (1040)
Q Consensus       162 ~~~~~~~L~~l~~~~~~~~w~~~~~fL~~~~~~~~~~l~~~g~~d~~~~~~~~~~~~~~~~-----~~~~~~~i~v~g~~  236 (1040)
T Consensus       145 ~~~~~~~~~~~~~~~~-------~~~~~~~y~~Y~~~l~~~~~~DFdDll~~~~~ll~~~~~v~~~~~~r~~~IlVDEfQ  217 (672)
T PRK10919        145 DLKTPAQAAAGAKGER-------DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQ  217 (672)
T ss_pred             HCCCHHHHHHHCCCHH-------HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCEEEEEECHH
T ss_conf             1799999987610507-------799999999999999986998879999999999852899999999754089762240


Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCC
Q ss_conf             66167999999986148968998248632107888643342012333334446763689999997629996660257766
Q gi|254780823|r  237 GSIPATARLMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKSTNITSSNTTYSTHPQYSLAKLLDFLDIKREDVKRLGNV  316 (1040)
Q Consensus       237 ~~~~~~~~ll~al~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (1040)
T Consensus       218 Dtn~~Q~~ll~~L~~~--~~~l~vVGD~dQSIY~FRGA~~~~i~~f~~~f~~~~-------------------~i~L~~N  276 (672)
T PRK10919        218 DTNTSQYELVKLLVGS--RARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALK-------------------VIKLEQN  276 (672)
T ss_pred             CCCHHHHHHHHHHHCC--CCCEEEECCCCCEEEHHHCCCHHHHHHHHHHCCCCE-------------------EEEEHHC
T ss_conf             4999999999997279--984777379662300750677689999887566774-------------------9984232


Q ss_pred             CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH---HCCCEEEEEE
Q ss_conf             6453677775444201112210000001235676532133781599559989999999999999864---2298499980
Q gi|254780823|r  317 SNEMYGRSMVISKSFLPPDTSDMRNTDILENKIPNIQKCFSDVALIEADNEREEAISIAIALRMSLD---ENKKKSALIT  393 (1040)
Q Consensus       317 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~Ea~~ia~~lr~~~~---~~~~~~avv~  393 (1040)
T Consensus       277 yRS~~~Il~~an~li~~n~~~------~~k~l~~~-~~~g~~~~~~~~~~~~~Ea~~i~~~ii~~~~~~~~~~~diAIL~  349 (672)
T PRK10919        277 YRSSGRILKAANILIANNPHV------FEKRLFSE-LGYGDELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILY  349 (672)
T ss_pred             CCCCHHHHHHHHHHHHHCCCC------CCCCHHHH-CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             499778999999987618321------11001332-27898617983598799999999999999873488835579995


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             26411357888435513777665690035288989999999998379997899998629654566793899999997322
Q gi|254780823|r  394 ADRNLARRVKLELTRFGINIDISAGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALEL  473 (1040)
Q Consensus       394 ~d~~~~~~v~~~L~~~gipv~~s~g~pL~~~p~v~~l~~ll~~~~~~~~~~~l~~LL~sPl~~~~~~~~~~~~~~~~~~~  473 (1040)
T Consensus       350 R~n~~~~~le~~L~~~~IPy~i~g~~~f~~r~eikdlla~Lr~l~np~d~~~~~ril~~p~~~i~~~~l~~l~~~-----  424 (672)
T PRK10919        350 RGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLQKLGEW-----  424 (672)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEECCCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH-----
T ss_conf             450322689999997799879957832312799999999999874987248999997073014799999999999-----


Q ss_pred             HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             32104557778111788875220114444345520101553432579999999899999987501100221023788999
Q gi|254780823|r  474 VALRGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVTYKTNKNSTCGNLSISDW  553 (1040)
Q Consensus       474 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~l~~~~~~~~~~~~~~~l~~~  553 (1040)
T Consensus       425 -~~~~~------~~l~~~~~~~~~~-----------~~l~~~~~~~l~~~~~~l----~~~~~~~~~~----~~~~~~~l  478 (672)
T PRK10919        425 -AMTRN------KSLFTASFDMGLS-----------QTLTGRGYESLTRFTHWL----AEIQRLAERE----PVAAVRDL  478 (672)
T ss_pred             -HHHCC------CCHHHHHHHHHHH-----------HCCCHHHHHHHHHHHHHH----HHHHHHHHCC----CHHHHHHH
T ss_conf             -98637------6689999875430-----------002677899999999999----9999986248----37899999


Q ss_pred             HHHH--HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHH--HHHHCCCCCCCCCCCCCCE
Q ss_conf             9999--999972367632111456657779999999986642137-6644778899999--9862244335667787737
Q gi|254780823|r  554 TKLT--VTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGS-CIKANAIEWIDII--TRLIDGETVKPKIEKSSTL  628 (1040)
Q Consensus       554 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~v  628 (1040)
T Consensus       479 ~~~~~~~~~l~~~~~~~~~~~---~r~~n~~~l~~~~~e~~~~~~~~~~~~l~~~~~~~~l~~~~~---~~~~~~~~~~V  552 (672)
T PRK10919        479 IHGIDYESWLYETSPSPKAAE---MRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMME---RGESEEELDQV  552 (672)
T ss_pred             HHHHHHHHHHHHHCCCCHHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH---CCCCCCCCCEE
T ss_conf             998638889987367840289---999999999999999973455465220999999988776664---37656789908


Q ss_pred             EECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-EEEEEEECCCCC
Q ss_conf             9803433356658637852863113456666676489678856489996678889999999985598-599992046777
Q gi|254780823|r  629 FILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFLSRVMQSDLNLKTAEKYIGQAAHDFEMANGTR-HLIYTRSLRENN  707 (1040)
Q Consensus       629 ~v~~~~~a~~~~~~~v~v~gl~e~~~P~~~~~~~~l~~~~r~~l~l~~~e~~~~~~~~~~~~~~~a~-~v~lt~~~~~~~  707 (1040)
T Consensus       553 ~LmTiH~SKGLEf~~Vfl~gl~eg~~P~~~~~~~---------------~~~eEERRLfYVa~TRAk~~L~ls~~~~r~~  617 (672)
T PRK10919        553 QLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDE---------------DNIDEERRLAYVGITRAQKELTFTLCKERRQ  617 (672)
T ss_pred             EEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCC---------------CHHHHHHHHHHHHHHHHHHHHEEEECCHHHH
T ss_conf             9964886231036879996783899987656998---------------6087999999999999877665500452343


Q ss_pred             ----CCCCCCHHHHHHHH
Q ss_conf             ----66566537888773
Q gi|254780823|r  708 ----IPTIASRWLQRLLV  721 (1040)
Q Consensus       708 ----~~~~ps~~l~~l~~  721 (1040)
T Consensus       618 ~g~~~~~~pSrFl~eip~  635 (672)
T PRK10919        618 YGELVRPEPSRFLLELPQ  635 (672)
T ss_pred             CCCCCCCCCCCCHHHCCH
T ss_conf             887758999946213789