HHsearch alignment for GI: 254780823 and conserved domain: PRK10919
>PRK10919 ATP-dependent DNA helicase Rep; Provisional.
Probab=100.00 E-value=7.3e-36 Score=251.65 Aligned_cols=601 Identities=12% Similarity=0.061 Sum_probs=331.1
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCEECCEEEEHHH
Q ss_conf 88848983898893799999997112101123678981332220676279689999999998511888651403312577
Q gi|254780823|r 4 KKPNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQELRSEFIEITGKKSTILPIIKSLGD 83 (1040)
Q Consensus 4 ~~~~v~~~~~~~~fl~~~a~~l~~~~~~~~~~~~~~~p~~L~~v~vl~ptrraa~~Lr~~l~~~~~~~~~~~P~i~t~~~ 83 (1040)
T Consensus 15 ~gp~lVlAGaGSGKT~tLt~-Ria~Li-~~---~~v~P~---~ILalTFT~kAA~Emk~Rl~~~lg~~~~~~~~i~TFHS 86 (672)
T PRK10919 15 TGPCLVLAGAGSGKTRVITN-KIAHLI-RG---CGYQAR---HIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHT 86 (672)
T ss_pred CCCEEEEECCCHHHHHHHHH-HHHHHH-HC---CCCCCC---CEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEECHHH
T ss_conf 99989997385587999999-999998-66---898933---38544217999999999999771832137867884899
Q ss_pred HHHHHHHCCCCCC-CCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6565540454334-677888-88189999999999999863100000012232111356978899989999999999997
Q gi|254780823|r 84 VVEEKFTADLLLS-YNLNPP-VSNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIET 161 (1040)
Q Consensus 84 ~~~~~~~~~~~~~-~~~~~~-~~~~~r~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~L~~l~d~~~~ 161 (1040)
T Consensus 87 ~~~~iLr~~~~~lg~~~~f~i~d~~d~~~~~k~~~~~~~~~~----------------------~~~~~~~~~~i~~~k~ 144 (672)
T PRK10919 87 LGLDIIKREYAALGMKSNFSLFDDTDQLALLKELTEGLIEDD----------------------KVLLQQLISTISNWKN 144 (672)
T ss_pred HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCC----------------------HHHHHHHHHHHHHHHH
T ss_conf 999999998998289999836169999999999998732023----------------------4789999999999987
Q ss_pred CCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-----HCCCCCEEEEEECC
Q ss_conf 5999789874002202079999999999999999997532488898999999998744344-----22768809998345
Q gi|254780823|r 162 EEKKWEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAEHL-----MKGTKGPIIIAGST 236 (1040)
Q Consensus 162 ~~~~~~~L~~l~~~~~~~~w~~~~~fL~~~~~~~~~~l~~~g~~d~~~~~~~~~~~~~~~~-----~~~~~~~i~v~g~~ 236 (1040)
T Consensus 145 ~~~~~~~~~~~~~~~~-------~~~~~~~y~~Y~~~l~~~~~~DFdDll~~~~~ll~~~~~v~~~~~~r~~~IlVDEfQ 217 (672)
T PRK10919 145 DLKTPAQAAAGAKGER-------DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQ 217 (672)
T ss_pred HCCCHHHHHHHCCCHH-------HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCEEEEEECHH
T ss_conf 1799999987610507-------799999999999999986998879999999999852899999999754089762240
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCC
Q ss_conf 66167999999986148968998248632107888643342012333334446763689999997629996660257766
Q gi|254780823|r 237 GSIPATARLMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKSTNITSSNTTYSTHPQYSLAKLLDFLDIKREDVKRLGNV 316 (1040)
Q Consensus 237 ~~~~~~~~ll~al~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (1040)
T Consensus 218 Dtn~~Q~~ll~~L~~~--~~~l~vVGD~dQSIY~FRGA~~~~i~~f~~~f~~~~-------------------~i~L~~N 276 (672)
T PRK10919 218 DTNTSQYELVKLLVGS--RARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALK-------------------VIKLEQN 276 (672)
T ss_pred CCCHHHHHHHHHHHCC--CCCEEEECCCCCEEEHHHCCCHHHHHHHHHHCCCCE-------------------EEEEHHC
T ss_conf 4999999999997279--984777379662300750677689999887566774-------------------9984232
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH---HCCCEEEEEE
Q ss_conf 6453677775444201112210000001235676532133781599559989999999999999864---2298499980
Q gi|254780823|r 317 SNEMYGRSMVISKSFLPPDTSDMRNTDILENKIPNIQKCFSDVALIEADNEREEAISIAIALRMSLD---ENKKKSALIT 393 (1040)
Q Consensus 317 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~Ea~~ia~~lr~~~~---~~~~~~avv~ 393 (1040)
T Consensus 277 yRS~~~Il~~an~li~~n~~~------~~k~l~~~-~~~g~~~~~~~~~~~~~Ea~~i~~~ii~~~~~~~~~~~diAIL~ 349 (672)
T PRK10919 277 YRSSGRILKAANILIANNPHV------FEKRLFSE-LGYGDELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILY 349 (672)
T ss_pred CCCCHHHHHHHHHHHHHCCCC------CCCCHHHH-CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 499778999999987618321------11001332-27898617983598799999999999999873488835579995
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 26411357888435513777665690035288989999999998379997899998629654566793899999997322
Q gi|254780823|r 394 ADRNLARRVKLELTRFGINIDISAGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALEL 473 (1040)
Q Consensus 394 ~d~~~~~~v~~~L~~~gipv~~s~g~pL~~~p~v~~l~~ll~~~~~~~~~~~l~~LL~sPl~~~~~~~~~~~~~~~~~~~ 473 (1040)
T Consensus 350 R~n~~~~~le~~L~~~~IPy~i~g~~~f~~r~eikdlla~Lr~l~np~d~~~~~ril~~p~~~i~~~~l~~l~~~----- 424 (672)
T PRK10919 350 RGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLQKLGEW----- 424 (672)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEECCCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH-----
T ss_conf 450322689999997799879957832312799999999999874987248999997073014799999999999-----
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 32104557778111788875220114444345520101553432579999999899999987501100221023788999
Q gi|254780823|r 474 VALRGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVTYKTNKNSTCGNLSISDW 553 (1040)
Q Consensus 474 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~l~~~~~~~~~~~~~~~l~~~ 553 (1040)
T Consensus 425 -~~~~~------~~l~~~~~~~~~~-----------~~l~~~~~~~l~~~~~~l----~~~~~~~~~~----~~~~~~~l 478 (672)
T PRK10919 425 -AMTRN------KSLFTASFDMGLS-----------QTLTGRGYESLTRFTHWL----AEIQRLAERE----PVAAVRDL 478 (672)
T ss_pred -HHHCC------CCHHHHHHHHHHH-----------HCCCHHHHHHHHHHHHHH----HHHHHHHHCC----CHHHHHHH
T ss_conf -98637------6689999875430-----------002677899999999999----9999986248----37899999
Q ss_pred HHHH--HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHH--HHHHCCCCCCCCCCCCCCE
Q ss_conf 9999--999972367632111456657779999999986642137-6644778899999--9862244335667787737
Q gi|254780823|r 554 TKLT--VTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGS-CIKANAIEWIDII--TRLIDGETVKPKIEKSSTL 628 (1040)
Q Consensus 554 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~v 628 (1040)
T Consensus 479 ~~~~~~~~~l~~~~~~~~~~~---~r~~n~~~l~~~~~e~~~~~~~~~~~~l~~~~~~~~l~~~~~---~~~~~~~~~~V 552 (672)
T PRK10919 479 IHGIDYESWLYETSPSPKAAE---MRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMME---RGESEEELDQV 552 (672)
T ss_pred HHHHHHHHHHHHHCCCCHHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH---CCCCCCCCCEE
T ss_conf 998638889987367840289---999999999999999973455465220999999988776664---37656789908
Q ss_pred EECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-EEEEEEECCCCC
Q ss_conf 9803433356658637852863113456666676489678856489996678889999999985598-599992046777
Q gi|254780823|r 629 FILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFLSRVMQSDLNLKTAEKYIGQAAHDFEMANGTR-HLIYTRSLRENN 707 (1040)
Q Consensus 629 ~v~~~~~a~~~~~~~v~v~gl~e~~~P~~~~~~~~l~~~~r~~l~l~~~e~~~~~~~~~~~~~~~a~-~v~lt~~~~~~~ 707 (1040)
T Consensus 553 ~LmTiH~SKGLEf~~Vfl~gl~eg~~P~~~~~~~---------------~~~eEERRLfYVa~TRAk~~L~ls~~~~r~~ 617 (672)
T PRK10919 553 QLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDE---------------DNIDEERRLAYVGITRAQKELTFTLCKERRQ 617 (672)
T ss_pred EEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCC---------------CHHHHHHHHHHHHHHHHHHHHEEEECCHHHH
T ss_conf 9964886231036879996783899987656998---------------6087999999999999877665500452343
Q ss_pred ----CCCCCCHHHHHHHH
Q ss_conf ----66566537888773
Q gi|254780823|r 708 ----IPTIASRWLQRLLV 721 (1040)
Q Consensus 708 ----~~~~ps~~l~~l~~ 721 (1040)
T Consensus 618 ~g~~~~~~pSrFl~eip~ 635 (672)
T PRK10919 618 YGELVRPEPSRFLLELPQ 635 (672)
T ss_pred CCCCCCCCCCCCHHHCCH
T ss_conf 887758999946213789