HHsearch alignment of GI: 254780823 and MMDB domain: 1uaa_A_377-543

>1uaa_A (A:377-543) REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli}

Probab=96.05  E-value=0.016  Score=32.51  Aligned_cols=48  Identities=15%  Similarity=0.053  Sum_probs=41.4

Q ss_pred             HHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf             352889899999999983799978999986296545667938999999
Q gi|254780823|r  421 LSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAK  468 (1040)
Q Consensus       421 L~~~p~v~~l~~ll~~~~~~~~~~~l~~LL~sPl~~~~~~~~~~~~~~  468 (1040)
                      +.+++.|++++++|+++.+|.|..+++++|++|.++++..+.......
T Consensus         1 Fyer~eI~dila~Lr~i~np~D~~al~ril~~P~~gi~~~~l~~i~~~   48 (167)
T 1uaa_A            1 FFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKKLGEW   48 (167)
T ss_dssp             GGGCHHHHHHHHHHHHHHCTTCHHHHHHHSSTTCCCCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHH
T ss_conf             003599999999999981988669999998360220113567777765