HHsearch alignment of GI: 254780823 and MMDB domain: 2vld_A_122-251

>2vld_A (A:122-251) NUCS, UPF0286 protein pyrab01260; endonuclease, hydrolase; 2.60A {Pyrococcus abyssi}
Probab=95.46  E-value=0.12  Score=26.73  Aligned_cols=70  Identities=17%  Similarity=0.242  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHHC-CCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHH
Q ss_conf             9999999999732-468859999965688978823799999978888799858999726853468879842301216999
Q gi|254780823|r  862 KISHSFLEHEEKI-QSSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDYKTGDNPKKETAQKLIDPQLSLE  940 (1040)
Q Consensus       862 ~~~~~~l~~~~~~-~~~~~~~~~E~~~~~~i~~~~~~l~GrIDRid~~~dG~~~IvDYKTG~~p~~~~~~~~~~~QL~lY  940 (1040)
                      +.++.++....+. ..+++.+..|..    ++      .|+||-+..+++|+++||.+|+|+...  ++    --|+.-|
T Consensus         7 ~dLe~~i~~n~~~l~~g~~~v~~E~~----~~------~g~IDll~~d~~~~~ViIElK~~~~~~--~~----i~Ql~~Y   70 (130)
T 2vld_A            7 AEXANLIFENPRVIEEGFKPIYREKP----IR------HGIVDVXGVDKDGNIVVLELKRRKADL--HA----VSQXKRY   70 (130)
T ss_dssp             HHHHHHHHHCGGGTCTTCEEEEEEEE----ET------TEEEEEEEECTTSCEEEEEECSSCBCH--HH----HHHHHHH
T ss_pred             HHHHHHHHHCHHHHCCCCEEEEEEEE----CC------CCCEEEEEEECCCCEEEEEEEECCCCH--HH----HHHHHHH
T ss_conf             99999998699986789689999997----18------886689999179999999997047987--48----9999999


Q ss_pred             HHHHHHC
Q ss_conf             9999828
Q gi|254780823|r  941 AAALKAG  947 (1040)
Q Consensus       941 ~~~~~~~  947 (1040)
                      +-.+...
T Consensus        71 ~~~~~~~   77 (130)
T 2vld_A           71 VDSLKEE   77 (130)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHC
T ss_conf             9998612