HHsearch alignment of GI: 254780823 and MMDB domain: 3h4r_A_

>3h4r_A (A:) Exodeoxyribonuclease 8; exonuclease, recombination, hydrolase; 2.80A {Escherichia coli k-12}
Probab=99.94  E-value=1.5e-27  Score=196.62  Aligned_cols=244  Identities=13%  Similarity=-0.046  Sum_probs=151.5

Q ss_pred             CCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             01246778004577642836888976328888872124899889989999999999861258983478999999999996
Q gi|254780823|r  764 EAQPRTYSFSEIKQLINDPYAVYARRILKLDFIPHFKKDPDRTDRGTLFHNIITELIKKRINKNTPEINHLMKQIIDSHF  843 (1040)
Q Consensus       764 ~~~~~~lS~S~l~~~~~cP~~~~~~~~l~l~~~~~~~~~~~a~~~GtlvH~~Le~~~~~~~~~~~~~~~~~l~~~~~~~~  843 (1040)
                      ...+..+|+|.+++|..||++||+++++++++...     .++.+||++|.+|+.++..............+........
T Consensus         7 ~~~~~~~S~S~l~~~~~Cp~~~~~~~~~~~~~~~~-----~~~~~G~~~H~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (265)
T 3h4r_A            7 YHAGPGISKSQLDDIADTPALYLWRKNAPVDTTKT-----KTLDLGTAFHCRVLELEEFSNRFIVAPEFNRRTNAGKEEE   81 (265)
T ss_dssp             ----CCBCHHHHHHHHHCHHHHHHHTTSCCCCCCC-----SCCTHHHHHHHHHSSHHHHTCC------------------
T ss_pred             HCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCC-----HHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf             44899839889999985999999997378999997-----7998729999987472232123324663023456666799


Q ss_pred             HHCCC------CHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEE
Q ss_conf             53279------866999999999999999999997324--6885999996568897882379999997888879985899
Q gi|254780823|r  844 EKENL------PPHIDIIWRHLFHKISHSFLEHEEKIQ--SSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDI  915 (1040)
Q Consensus       844 ~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~E~~~~~~i~~~~~~l~GrIDRid~~~dG~~~I  915 (1040)
                      .....      .......+..++..++.++...+....  .......  .+..+.++..++.++|+||||+   +|.+.|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~l~G~iD~i~---~~~~~I  156 (265)
T 3h4r_A           82 KAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAE--SSIYWEDPETGILCRCRPDKII---PEFHWI  156 (265)
T ss_dssp             ----------------CCCTTHHHHHHHHHTTSHHHHHHHSSSCBSS--CCEEEECTTTCCEEEECCSEEE---GGGTEE
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCE--EEEEEEECCCCEEEEEEEEEEE---CCCCEE
T ss_conf             99986555316542129999999999999982954676654202314--7899997676648888899997---799748


Q ss_pred             EECCCCCCCCHH---HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC--CCCCCCCCCCCCCHHHHHHHH
Q ss_conf             972685346887---984230121699999998288677785574213888606866--554345654558988899999
Q gi|254780823|r  916 TDYKTGDNPKKE---TAQKLIDPQLSLEAAALKAGSFSQIDCRKVANLFYIRLKQKF--KIDCITNDKKKYSADELSEKS  990 (1040)
Q Consensus       916 vDYKTG~~p~~~---~~~~~~~~QL~lY~~~~~~~~~~~~~~~~~~~~~y~~l~~~~--~~~~~~~~~~~~~~~~~~~~~  990 (1040)
                      ||||||+.++..   +...++.+||++|++++++.     .+..+....|+.+..+.  ..............++..+++
T Consensus       157 iDyKTg~~~~~~~~~~~~~~~~~Ql~lY~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (265)
T 3h4r_A          157 MDVKTTADIQRFKTAYYDYRYHVQDAFYSDGYEAQ-----FGVQPTFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEY  231 (265)
T ss_dssp             EEEEEESCHHHHHHHHHHHTTTHHHHHHHHHHHHH-----HSSCCEEEEEEEESSCBTTBCCEEEEECCHHHHHHHHHHH
T ss_pred             EEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHH-----CCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHH
T ss_conf             89830267776532012337799999999999984-----2999863999998335677622799968999999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             999999999984889885555451015668986544
Q gi|254780823|r  991 LKNLIEIVTLLQNGEQPFISHLRLSEKSNIQSEYDH 1026 (1040)
Q Consensus       991 ~~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~ 1026 (1040)
                      .+.+..+...+.++..|    +......|.||+|+.
T Consensus       232 ~~~~~~~~~~~~~~~~~----~~~~~~~C~~C~~k~  263 (265)
T 3h4r_A          232 HRNLRTLSDCLNTDEWP----AIKTLSLPRWAKEYA  263 (265)
T ss_dssp             HHHHHHHHHHHHTCCCC----CCCCCCCCTTCTTCC
T ss_pred             HHHHHHHHHHHHCCCCC----CCCCCCCCCCCCCCC
T ss_conf             99999999999669799----986467884511000