HHsearch alignment of GI: 254780823 and MMDB domain: 3l0a_A_
>3l0a_A (A:) Putative exonuclease; RER070207002219, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PE4; 2.19A {Eubacterium rectale}
Probab=99.90 E-value=5.2e-24 Score=173.50 Aligned_cols=220 Identities=11% Similarity=-0.043 Sum_probs=135.6
Q ss_pred CCCCCCCCCHHHHHHC------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 1246778004577642------8368889763288888721248998899899999999998612589834789999999
Q gi|254780823|r 765 AQPRTYSFSEIKQLIN------DPYAVYARRILKLDFIPHFKKDPDRTDRGTLFHNIITELIKKRINKNTPEINHLMKQI 838 (1040)
Q Consensus 765 ~~~~~lS~S~l~~~~~------cP~~~~~~~~l~l~~~~~~~~~~~a~~~GtlvH~~Le~~~~~~~~~~~~~~~~~l~~~ 838 (1040)
..+..+|+|++++|.. ||++|+++++.++++... ++..+||++|++||.++........
T Consensus 14 ~~~~~~S~S~l~~~~~~~~~~~cp~~~~~~~~~~~~~~~~-----~a~~~Gt~iH~~le~~~~~~~~~~~---------- 78 (266)
T 3l0a_A 14 ANKEYXSVSGYKDFAGTYGKXPCEFYGXEKLNGRWEDEKS-----TALLVGSYVDSYFEGSLDQFKKDNP---------- 78 (266)
T ss_dssp HHHHCEEHHHHHHHHCBTTBCCCHHHHHHHHHTSCCCCCC-----HHHHHHHHHHHHHHTCHHHHHHHCG----------
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHCC----------
T ss_conf 6786547868999844951000779999986176788898-----7899978999998727676544173----------
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEEC
Q ss_conf 99996532798669999999999999999999973246885999996568897882379999997888879985899972
Q gi|254780823|r 839 IDSHFEKENLPPHIDIIWRHLFHKISHSFLEHEEKIQSSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDY 918 (1040)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~E~~~~~~i~~~~~~l~GrIDRid~~~dG~~~IvDY 918 (1040)
... ........++..+.+++..+...+... .+.....|..+.+.++ ++.++|+||||| +.+.||||
T Consensus 79 -----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~E~~~~~~~~--g~~l~GriD~id----~~~~IiDy 144 (266)
T 3l0a_A 79 -----EIF-TQKGELKANFKQAEEIIARIERDEYFX--KYXSGQKQVIXTGELF--GAKWKIKXDSYI----PGVAIVDL 144 (266)
T ss_dssp -----GGB-CTTSSBCHHHHHHHHHHHHHHTCHHHH--HHTTSEEEEEEEEEET--TEEEEEEEEEEE----TTTEEEEE
T ss_pred -----CCC-CCCCHHHHHHHHHHHHHHHHHHCCHHH--HHCCCCEEEEEEEEEC--CEEEEEEEEEEE----CCCEEEEE
T ss_conf -----100-212056899999999999999570456--6435763789999876--937651467993----68759995
Q ss_pred CCCCCCCHHH-----------HHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 6853468879-----------84230121699999998288677785574213888606866554345654558988899
Q gi|254780823|r 919 KTGDNPKKET-----------AQKLIDPQLSLEAAALKAGSFSQIDCRKVANLFYIRLKQKFKIDCITNDKKKYSADELS 987 (1040)
Q Consensus 919 KTG~~p~~~~-----------~~~~~~~QL~lY~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~ 987 (1040)
|||+.++.++ ...++..||++|++++++. .+..+ ...++.+..+........... ++.+
T Consensus 145 KT~~~~~~~~~~~~~~~~~~~~~~~y~~Ql~~Y~~~~~~~-----~~~~~-~~~~i~~~~~~~~~~~~~~~~----~~~i 214 (266)
T 3l0a_A 145 KVXASITDLKWVKDIGYLDFVRYWGYDIQGAVYQEIVRQN-----TGEKL-PFFIAGATKQTEPDIRIIHVT----DNYL 214 (266)
T ss_dssp EEESCSSCCEEETTTEEECHHHHTTHHHHHHHHHHHHHHH-----HSCCC-CEEEEEEECSSSCCEEEEEEC----HHHH
T ss_pred EECCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH-----HCCCC-CEEEEEEECCCCCCEEEEECC----HHHH
T ss_conf 4336565221244112355788608399999999999998-----68987-359999977898732388479----8999
Q ss_pred HHHHHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99999999999998---488988555545101566898654420
Q gi|254780823|r 988 EKSLKNLIEIVTLL---QNGEQPFISHLRLSEKSNIQSEYDHLA 1028 (1040)
Q Consensus 988 ~~~~~~l~~~~~~~---~~~~~~f~~~~~~~~~~~~~~~y~~l~ 1028 (1040)
+...+.+..++..+ .++. |.++ + ...|.||+|..+|
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~--~~p~--~-~~~C~~C~~~~~c 253 (266)
T 3l0a_A 215 QEALHXVEXNXPRILRVKNGE--VEPD--R-CELCDCCRHNRVL 253 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS--SCCC--C-CSCSHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCC--CCCC--C-CCCCCCCCCCCHH
T ss_conf 999999999999999997598--4799--9-9979886101101