HHsearch alignment of GI: 254780823 and MMDB domain: 3l0a_A_

>3l0a_A (A:) Putative exonuclease; RER070207002219, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PE4; 2.19A {Eubacterium rectale}
Probab=99.90  E-value=5.2e-24  Score=173.50  Aligned_cols=220  Identities=11%  Similarity=-0.043  Sum_probs=135.6

Q ss_pred             CCCCCCCCCHHHHHHC------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             1246778004577642------8368889763288888721248998899899999999998612589834789999999
Q gi|254780823|r  765 AQPRTYSFSEIKQLIN------DPYAVYARRILKLDFIPHFKKDPDRTDRGTLFHNIITELIKKRINKNTPEINHLMKQI  838 (1040)
Q Consensus       765 ~~~~~lS~S~l~~~~~------cP~~~~~~~~l~l~~~~~~~~~~~a~~~GtlvH~~Le~~~~~~~~~~~~~~~~~l~~~  838 (1040)
                      ..+..+|+|++++|..      ||++|+++++.++++...     ++..+||++|++||.++........          
T Consensus        14 ~~~~~~S~S~l~~~~~~~~~~~cp~~~~~~~~~~~~~~~~-----~a~~~Gt~iH~~le~~~~~~~~~~~----------   78 (266)
T 3l0a_A           14 ANKEYXSVSGYKDFAGTYGKXPCEFYGXEKLNGRWEDEKS-----TALLVGSYVDSYFEGSLDQFKKDNP----------   78 (266)
T ss_dssp             HHHHCEEHHHHHHHHCBTTBCCCHHHHHHHHHTSCCCCCC-----HHHHHHHHHHHHHHTCHHHHHHHCG----------
T ss_pred             CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHCC----------
T ss_conf             6786547868999844951000779999986176788898-----7899978999998727676544173----------


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEEC
Q ss_conf             99996532798669999999999999999999973246885999996568897882379999997888879985899972
Q gi|254780823|r  839 IDSHFEKENLPPHIDIIWRHLFHKISHSFLEHEEKIQSSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDY  918 (1040)
Q Consensus       839 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~E~~~~~~i~~~~~~l~GrIDRid~~~dG~~~IvDY  918 (1040)
                           ... ........++..+.+++..+...+...  .+.....|..+.+.++  ++.++|+|||||    +.+.||||
T Consensus        79 -----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~E~~~~~~~~--g~~l~GriD~id----~~~~IiDy  144 (266)
T 3l0a_A           79 -----EIF-TQKGELKANFKQAEEIIARIERDEYFX--KYXSGQKQVIXTGELF--GAKWKIKXDSYI----PGVAIVDL  144 (266)
T ss_dssp             -----GGB-CTTSSBCHHHHHHHHHHHHHHTCHHHH--HHTTSEEEEEEEEEET--TEEEEEEEEEEE----TTTEEEEE
T ss_pred             -----CCC-CCCCHHHHHHHHHHHHHHHHHHCCHHH--HHCCCCEEEEEEEEEC--CEEEEEEEEEEE----CCCEEEEE
T ss_conf             -----100-212056899999999999999570456--6435763789999876--937651467993----68759995


Q ss_pred             CCCCCCCHHH-----------HHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             6853468879-----------84230121699999998288677785574213888606866554345654558988899
Q gi|254780823|r  919 KTGDNPKKET-----------AQKLIDPQLSLEAAALKAGSFSQIDCRKVANLFYIRLKQKFKIDCITNDKKKYSADELS  987 (1040)
Q Consensus       919 KTG~~p~~~~-----------~~~~~~~QL~lY~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~  987 (1040)
                      |||+.++.++           ...++..||++|++++++.     .+..+ ...++.+..+...........    ++.+
T Consensus       145 KT~~~~~~~~~~~~~~~~~~~~~~~y~~Ql~~Y~~~~~~~-----~~~~~-~~~~i~~~~~~~~~~~~~~~~----~~~i  214 (266)
T 3l0a_A          145 KVXASITDLKWVKDIGYLDFVRYWGYDIQGAVYQEIVRQN-----TGEKL-PFFIAGATKQTEPDIRIIHVT----DNYL  214 (266)
T ss_dssp             EEESCSSCCEEETTTEEECHHHHTTHHHHHHHHHHHHHHH-----HSCCC-CEEEEEEECSSSCCEEEEEEC----HHHH
T ss_pred             EECCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH-----HCCCC-CEEEEEEECCCCCCEEEEECC----HHHH
T ss_conf             4336565221244112355788608399999999999998-----68987-359999977898732388479----8999


Q ss_pred             HHHHHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99999999999998---488988555545101566898654420
Q gi|254780823|r  988 EKSLKNLIEIVTLL---QNGEQPFISHLRLSEKSNIQSEYDHLA 1028 (1040)
Q Consensus       988 ~~~~~~l~~~~~~~---~~~~~~f~~~~~~~~~~~~~~~y~~l~ 1028 (1040)
                      +...+.+..++..+   .++.  |.++  + ...|.||+|..+|
T Consensus       215 ~~~~~~~~~~~~~i~~~~~~~--~~p~--~-~~~C~~C~~~~~c  253 (266)
T 3l0a_A          215 QEALHXVEXNXPRILRVKNGE--VEPD--R-CELCDCCRHNRVL  253 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTS--SCCC--C-CSCSHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCC--CCCC--C-CCCCCCCCCCCHH
T ss_conf             999999999999999997598--4799--9-9979886101101