HHsearch results for GI: 254780823 and protein with PDBid: 2vld_A
>2vld_A NUCS, UPF0286 protein pyrab01260; endonuclease, hydrolase; 2.60A {Pyrococcus abyssi}
Probab=93.60 E-value=0.23 Score=23.90 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=40.5
Q ss_pred CCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 468859999965688978823799999978888799858999726853468879842301216999999982
Q gi|254780823|r 875 QSSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDYKTGDNPKKETAQKLIDPQLSLEAAALKA 946 (1040)
Q Consensus 875 ~~~~~~~~~E~~~~~~i~~~~~~l~GrIDRid~~~dG~~~IvDYKTG~~p~~~~~~~~~~~QL~lY~~~~~~ 946 (1040)
..+++++..|.. ++ .|+||-+..+.+|.++||..|.++... + + --||.-|.-.+++
T Consensus 142 ~~G~~~v~rE~~----t~------~G~iDll~~D~~g~~VvIElKr~~~~~--~---~-V~QL~rYv~~lr~ 197 (251)
T 2vld_A 142 EEGFKPIYREKP----IR------HGIVDVMGVDKDGNIVVLELKRRKADL--H---A-VSQMKRYVDSLKE 197 (251)
T ss_dssp CTTCEEEEEEEE----ET------TEEEEEEEECTTSCEEEEEECSSCBCH--H---H-HHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEE----CC------CCCEEEEEEECCCCEEEEEEEECCCCH--H---H-HHHHHHHHHHHHH
T ss_conf 789789999884----28------896558999079999999997047986--0---7-9999999999874