HHsearch results for GI: 254780823 and protein with PDBid: 3dmn_A

>3dmn_A Putative DNA helicase; APC89291.2, lactobacillus plantarum WCFS1, structural genomics, PSI-2, midwest center for structural genomics; HET: MSE; 1.66A {Lactobacillus plantarum}
Probab=97.19  E-value=0.00045  Score=41.69  Aligned_cols=66  Identities=14%  Similarity=0.212  Sum_probs=46.6

Q ss_pred             CCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-EEEEEEE
Q ss_conf             877379803433356658637852863113456666676489678856489996678889999999985598-5999920
Q gi|254780823|r  624 KSSTLFILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFLSRVMQSDLNLKTAEKYIGQAAHDFEMANGTR-HLIYTRS  702 (1040)
Q Consensus       624 ~~~~v~v~~~~~a~~~~~~~v~v~gl~e~~~P~~~~~~~~l~~~~r~~l~l~~~e~~~~~~~~~~~~~~~a~-~v~lt~~  702 (1040)
                      ..+.|.++|+|.++|++|++||++|+++...|..                    +    ..+.+|..+++|+ ++++++.
T Consensus        98 ~~~~I~v~Tih~~KGlEfd~Vil~~~~~~~~~~~--------------------~----~~~llYVa~TRAk~~L~i~~~  153 (174)
T 3dmn_A           98 LAPGVIVVPSFLAKGLEFDAVIVWNANQENYQRE--------------------D----ERQLLYTICSRAMHELTLVAV  153 (174)
T ss_dssp             CCSSEEEEEGGGCTTCCEEEEEEETCBTTTSCSG--------------------G----GHHHHHHHHTTEEEEEEEEEE
T ss_pred             CCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCH--------------------H----HHHHHHHHHHHCCCEEEEEEC
T ss_conf             5684799860303676479999956610334685--------------------5----654652145010028999989


Q ss_pred             CCCCCCCCCCCHHHHHHH
Q ss_conf             467776656653788877
Q gi|254780823|r  703 LRENNIPTIASRWLQRLL  720 (1040)
Q Consensus       703 ~~~~~~~~~ps~~l~~l~  720 (1040)
                      .       .+|+|+.++.
T Consensus       154 ~-------~~s~~l~~~~  164 (174)
T 3dmn_A          154 G-------SLSPLLARVN  164 (174)
T ss_dssp             S-------SBCGGGTTSC
T ss_pred             C-------CCCHHHHHCC
T ss_conf             9-------9899898479