HHsearch results for GI: 254780823 and protein with PDBid: 3h4r_A
>3h4r_A Exodeoxyribonuclease 8; exonuclease, recombination, hydrolase; 2.80A {Escherichia coli k-12}
Probab=99.64 E-value=1.6e-16 Score=123.31 Aligned_cols=172 Identities=16% Similarity=0.042 Sum_probs=94.3
Q ss_pred CCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHH---HHHHHH
Q ss_conf 6778004577642836888976328888872124899889989999999999861258983-478999999---999996
Q gi|254780823|r 768 RTYSFSEIKQLINDPYAVYARRILKLDFIPHFKKDPDRTDRGTLFHNIITELIKKRINKNT-PEINHLMKQ---IIDSHF 843 (1040)
Q Consensus 768 ~~lS~S~l~~~~~cP~~~~~~~~l~l~~~~~~~~~~~a~~~GtlvH~~Le~~~~~~~~~~~-~~~~~~l~~---~~~~~~ 843 (1040)
..+|+|++..|..||..|++.++.+..+.. ..+..+||++|.+++....-...... +........ ......
T Consensus 11 ~~lS~S~l~~~~~cP~~~~~~~~~~~~~~~-----t~a~~~Gt~vH~~lle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (265)
T 3h4r_A 11 PGISKSQLDDIADTPALYLWRKNAPVDTTK-----TKTLDLGTAFHCRVLELEEFSNRFIVAPEFNRRTNAGKEEEKAFL 85 (265)
T ss_dssp CCBCHHHHHHHHHCHHHHHHHTTSCCCCCC-----CSCCTHHHHHHHHHSSHHHHTCC----------------------
T ss_pred CCCCHHHHHHHHHCHHHHHHHHHCCCCCCC-----CHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 983988899998699999999727899999-----879986499999885755523432226502331567899999999
Q ss_pred HH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCC
Q ss_conf 53--2798669999999999999999999973246885999996568897882379999997888879985899972685
Q gi|254780823|r 844 EK--ENLPPHIDIIWRHLFHKISHSFLEHEEKIQSSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDYKTG 921 (1040)
Q Consensus 844 ~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~E~~~~~~i~~~~~~l~GrIDRid~~~dG~~~IvDYKTG 921 (1040)
.. ..........+...+..++..+........-.......|++..+..+..++.++||||++. .| ...||||||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~g~~~kgriD~~~--~d-~~~iiD~Kt~ 162 (265)
T 3h4r_A 86 MECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKII--PE-FHWIMDVKTT 162 (265)
T ss_dssp ------------CCCTTHHHHHHHHHTTSHHHHHHHSSSCBSSCCEEEECTTTCCEEEECCSEEE--GG-GTEEEEEEEE
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEEEEEE--CC-CCEEEEEEEC
T ss_conf 88663277644589999999999999848556765034553799898996577758888789985--68-8556764003
Q ss_pred CCCCH---HHHHCCCCCCHHHHHHHHHHC
Q ss_conf 34688---798423012169999999828
Q gi|254780823|r 922 DNPKK---ETAQKLIDPQLSLEAAALKAG 947 (1040)
Q Consensus 922 ~~p~~---~~~~~~~~~QL~lY~~~~~~~ 947 (1040)
+.|.. .-...+|+.|+++|+.+++..
T Consensus 163 ~~~~~~~~~~~~~~Y~~Q~a~Y~~~~~~~ 191 (265)
T 3h4r_A 163 ADIQRFKTAYYDYRYHVQDAFYSDGYEAQ 191 (265)
T ss_dssp SCHHHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 66777777665137899999999999996