HHsearch results for GI: 254780823 and protein with PDBid: 3l0a_A
>3l0a_A Putative exonuclease; RER070207002219, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PE4; 2.19A {Eubacterium rectale}
Probab=99.49 E-value=5.1e-13 Score=100.39 Aligned_cols=216 Identities=12% Similarity=-0.029 Sum_probs=109.2
Q ss_pred CCCCCCHHHHHHCCHHHHHH------HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 67780045776428368889------763288888721248998899899999999998612589834789999999999
Q gi|254780823|r 768 RTYSFSEIKQLINDPYAVYA------RRILKLDFIPHFKKDPDRTDRGTLFHNIITELIKKRINKNTPEINHLMKQIIDS 841 (1040)
Q Consensus 768 ~~lS~S~l~~~~~cP~~~~~------~~~l~l~~~~~~~~~~~a~~~GtlvH~~Le~~~~~~~~~~~~~~~~~l~~~~~~ 841 (1040)
.-+|+|.+.+|..||..+++ ...-...+. ...+..+||++|.++|..........+.
T Consensus 17 ~y~S~S~ik~~~~~~~~~~~~a~~~a~~~~~~~~~-----~t~al~~Gt~vH~~le~~~~~~~~~~~~------------ 79 (266)
T 3l0a_A 17 EYMSVSGYKDFAGTYGKMPCEFYGMEKLNGRWEDE-----KSTALLVGSYVDSYFEGSLDQFKKDNPE------------ 79 (266)
T ss_dssp HCEEHHHHHHHHCBTTBCCCHHHHHHHHHTSCCCC-----CCHHHHHHHHHHHHHHTCHHHHHHHCGG------------
T ss_pred EEECHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHHHHHHCHHHHHHHCCCC------------
T ss_conf 71269899998439311002688999860777889-----9879987189999865745534201842------------
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCC
Q ss_conf 96532798669999999999999999999973246885999996568897882379999997888879985899972685
Q gi|254780823|r 842 HFEKENLPPHIDIIWRHLFHKISHSFLEHEEKIQSSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDYKTG 921 (1040)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~E~~~~~~i~~~~~~l~GrIDRid~~~dG~~~IvDYKTG 921 (1040)
.+.....-. .+...+..++..+......... .....|+.+...+. ++.++|+||+|. .++ .|||+||.
T Consensus 80 ~~~~~~~~~----~e~~~~~~m~~~~~~~~~~~~~--~~~~~E~~~~~~~~--gv~~kg~iD~i~--~~~--~ivDlKtt 147 (266)
T 3l0a_A 80 IFTQKGELK----ANFKQAEEIIARIERDEYFMKY--MSGQKQVIMTGELF--GAKWKIKMDSYI--PGV--AIVDLKVM 147 (266)
T ss_dssp GBCTTSSBC----HHHHHHHHHHHHHHTCHHHHHH--TTSEEEEEEEEEET--TEEEEEEEEEEE--TTT--EEEEEEEE
T ss_pred CCCCCCHHH----HHHHHHHHHHHHHHHCCHHHHH--CCCCCEEEEEEEEC--CEEEEEEEEEEE--CCC--CEEEEEEE
T ss_conf 013331448----9999999999999967003555--15772478999775--858740678995--689--72676774
Q ss_pred CCCCHH-----------HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 346887-----------984230121699999998288677785574213888606866554345654558988899999
Q gi|254780823|r 922 DNPKKE-----------TAQKLIDPQLSLEAAALKAGSFSQIDCRKVANLFYIRLKQKFKIDCITNDKKKYSADELSEKS 990 (1040)
Q Consensus 922 ~~p~~~-----------~~~~~~~~QL~lY~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1040)
..++.+ -...+|..|+++|+.++++.. +..+ ...++.+..................+......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~Y~~Q~a~Y~~~l~~~~-----g~~~-~~~~v~v~k~~p~~~~~~~~~~~~l~~~~~~v 221 (266)
T 3l0a_A 148 ASITDLKWVKDIGYLDFVRYWGYDIQGAVYQEIVRQNT-----GEKL-PFFIAGATKQTEPDIRIIHVTDNYLQEALHMV 221 (266)
T ss_dssp SCSSCCEEETTTEEECHHHHTTHHHHHHHHHHHHHHHH-----SCCC-CEEEEEEECSSSCCEEEEEECHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH-----CCCC-CEEEEEEECCCCCCCEEEECCHHHHHHHHHHH
T ss_conf 11563224432103557775288999999999999986-----8986-37999997888876048977989999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 9999999999848898855554510156689865442014
Q gi|254780823|r 991 LKNLIEIVTLLQNGEQPFISHLRLSEKSNIQSEYDHLARV 1030 (1040)
Q Consensus 991 ~~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~l~r~ 1030 (1040)
.+.+..+. +..++... | ..|.+||| ||.
T Consensus 222 ~~~i~~i~-~~~~~~~~------p--~~C~~CdY---Cr~ 249 (266)
T 3l0a_A 222 EMNMPRIL-RVKNGEVE------P--DRCELCDC---CRH 249 (266)
T ss_dssp HHHHHHHH-HHHTTSSC------C--CCCSCSHH---HHH
T ss_pred HHHHHHHH-HHHCCCCC------C--CCCCCCCC---CHH
T ss_conf 99999999-99728968------9--98998987---720