Probab=99.81 E-value=1.4e-18 Score=135.21 Aligned_cols=311 Identities=14% Similarity=0.147 Sum_probs=168.9 Q ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHHC---CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHH Q ss_conf 8159955998999999999999986422---9849998026411357888435513777665690035288989999999 Q gi|254780823|r 358 DVALIEADNEREEAISIAIALRMSLDEN---KKKSALITADRNLARRVKLELTRFGINIDISAGIPLSTTLHSSILTSLL 434 (1040) Q Consensus 358 ~v~~~~a~~~~~Ea~~ia~~lr~~~~~~---~~~~avv~~d~~~~~~v~~~L~~~gipv~~s~g~pL~~~p~v~~l~~ll 434 (1040) .|.++.|.+..+||..|+..|.+.+..+ ..+|||++|....+..+...|.+.|||+....+..+..+|.+++++.++ T Consensus 2 pi~~~~~~~~~~Ea~~Ia~~I~~li~~g~~~~~DIAILvRt~~~~~~i~~~L~~~gIP~~~~~~~~~~~~~~i~~l~~~l 81 (333) T d1pjra2 2 PILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYL 81 (333) T ss_dssp CEEEEEEEEHHHHHHHHHHHHHHHHTTTSCCGGGEEEEESSGGGHHHHHHHHHHTTCCEEEETSCCGGGSHHHHHHHHHH T ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH T ss_conf 94799479999999999999999998699892888999878374999999999879998996886544167998999999 Q ss_pred HHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCC Q ss_conf 99837999789999862965456679389999999732232104557778111788875220114444345520101553 Q gi|254780823|r 435 NAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELVALRGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSE 514 (1040) Q Consensus 435 ~~~~~~~~~~~l~~LL~sPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1040) +++.+|.+...+..++.+|...................... ....+........ ...... T Consensus 82 ~~l~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~------------~~~~~~ 141 (333) T d1pjra2 82 RVIANPDDDLSLLRIINVPKRGIGASTIDKLVRYAADHELS--------LFEALGELEMIGL------------GAKAAG 141 (333) T ss_dssp HHHHCTTCHHHHHHHTTSSCCTTTSCCCC--------------------CTTTTTSHHHHCC------------TTTTTT T ss_pred HHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHH------------HHHHHH T ss_conf 99845541155665306863112211888988776531674--------8899987654332------------255555 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH---HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 432579999999899999987501100221023788999999999---99723676321114566577799999999866 Q gi|254780823|r 515 EDKELAVLLVDHILQCITPLVTYKTNKNSTCGNLSISDWTKLTVT---CLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKI 591 (1040) Q Consensus 515 ~~~~~~~~l~~~l~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 591 (1040) ... .....+..... ..........+..... ....+.... ..................... T Consensus 142 ~~~----~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 204 (333) T d1pjra2 142 ALA----AFRSQLEQWTQ-----------LQEYVSVTELVEEVLDKSGYREMLKAER--TIEAQSRLENLDEFLSVTKHF 204 (333) T ss_dssp TTH----HHHHHHHHHHH-----------HTTTSCHHHHHHHHHHHTSHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHH T ss_pred HHH----HHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHCCHHHHHHCC--CHHHHHHHHHHHHHHHHHHHH T ss_conf 556----78999998888-----------7764445899999998607276765216--877899898777689999975 Q ss_pred HHCCCCCCCCHHHHHHHHHHH--HCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH Q ss_conf 421376644778899999986--224433566778773798034333566586378528631134566666764896788 Q gi|254780823|r 592 IETGSCIKANAIEWIDIITRL--IDGETVKPKIEKSSTLFILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFLSRVMQ 669 (1040) Q Consensus 592 ~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~v~v~~~~~a~~~~~~~v~v~gl~e~~~P~~~~~~~~l~~~~r 669 (1040) ...... .....+....... .............+.|.+||.|.++|++|++|+++|++++.+|...... T Consensus 205 ~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~T~h~sKgle~~~v~~~g~~~~~~p~~~~~~-------- 274 (333) T d1pjra2 205 ENVSDD--KSLIAFLTDLALISDLDELDGTEQAAEGDAVMLMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLE-------- 274 (333) T ss_dssp HHHCSC--CCHHHHHHHTTTCC-------------CCCEEEEEGGGGTTCCEEEEEECCCBTBTTTBGGGGT-------- T ss_pred HHCCCH--HHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEECCCCCCHHCCCCEEECCCCCCCCCHHHCCC-------- T ss_conf 512733--5699999997753100000011334669968862301120222553021487668793233138-------- Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCC-EEEEEEECCC----CCCCCCCCHHHHHHHH Q ss_conf 56489996678889999999985598-5999920467----7766566537888773 Q gi|254780823|r 670 SDLNLKTAEKYIGQAAHDFEMANGTR-HLIYTRSLRE----NNIPTIASRWLQRLLV 721 (1040) Q Consensus 670 ~~l~l~~~e~~~~~~~~~~~~~~~a~-~v~lt~~~~~----~~~~~~ps~~l~~l~~ 721 (1040) ..+......+.+|+.+++|+ .++++++... ......||+|+.++.. T Consensus 275 ------~~~~l~EErRLlYVA~TRAk~~L~is~~~~~~~~g~~~~~~pS~Fl~el~~ 325 (333) T d1pjra2 275 ------DDDEMEEERRLAYVGITRAEEELVLTSAQMRTLFGNIQMDPPSRFLNEIPA 325 (333) T ss_dssp ------CHHHHHHHHHHHHHHHTTEEEEEEEEEEEEEEETTEEECCCBCHHHHHSCG T ss_pred ------CCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHCH T ss_conf ------825389999999989998977479988550233778646988963887489
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: DEXX box DNA helicase
species: Bacillus stearothermophilus, PcrA [TaxId: 1422]