Probab=98.10 E-value=0.00024 Score=41.91 Aligned_cols=235 Identities=11% Similarity=0.037 Sum_probs=112.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCEECCEEEEHHHHH
Q ss_conf 84898389889379999999711210112367898133222067627968999999999851188865140331257765
Q gi|254780823|r 6 PNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQELRSEFIEITGKKSTILPIIKSLGDVV 85 (1040)
Q Consensus 6 ~~v~~~~~~~~fl~~~a~~l~~~~~~~~~~~~~~~p~~L~~v~vl~ptrraa~~Lr~~l~~~~~~~~~~~P~i~t~~~~~ 85 (1040)
|-...-+||.. ++.+-.-....+... .+..| .+|+|+++|+.++..+++.+.+..+....-.+.+.+++.++
T Consensus 16 ~~lI~g~aGTG--KTt~l~~rv~~ll~~---~~~~~---~~ILvlt~tn~a~~~i~~~~~~~~~~~~~~~~~~~t~~~~~ 87 (306)
T d1uaaa1 16 PCLVLAGAGSG--KTRVITNKIAHLIRG---CGYQA---RHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLG 87 (306)
T ss_dssp EEEECCCTTSC--HHHHHHHHHHHHHHH---HCCCG---GGEEEEESSHHHHHHHHHHHHHHSCTTTTTTSEEEEHHHHH
T ss_pred CEEEEEECCCC--HHHHHHHHHHHHHHH---CCCCH---HHEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH
T ss_conf 98999628843--899999999999995---69995---57899968699999999999985373101352553067899
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 65540454334677888881899999999999998631000000122321113569788999899999999999975999
Q gi|254780823|r 86 EEKFTADLLLSYNLNPPVSNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEEKK 165 (1040)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~L~~l~d~~~~~~~~ 165 (1040)
...+....... ...+.......... ........... .. ... .....+.............
T Consensus 88 ~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~----~~----------~~~----~~~~~~~~~~~~~~~~~~~ 147 (306)
T d1uaaa1 88 LDIIKREYAAL-GMKANFSLFDDTDQ-LALLKELTEGL----IE----------DDK----VLLQQLISTISNWKNDLKT 147 (306)
T ss_dssp HHHHHHHHHHT-TCCCCCCEECHHHH-HHHHHHHTSTT----SC----------SCH----HHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHC-CCCCCCEEEHHHHH-HHHHHHHHHHH----HH----------HHH----HHHHHHHHHHHHHHHHHHC
T ss_conf 99999889980-88988621033556-65555577765----20----------113----3467887776555443200
Q ss_pred HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH---HH--HHHHHCCCCCEEEEEECCCCCH
Q ss_conf 789874002202079999999999999999997532488898999999998---74--4344227688099983456616
Q gi|254780823|r 166 WEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMR---AE--AEHLMKGTKGPIIIAGSTGSIP 240 (1040)
Q Consensus 166 ~~~L~~l~~~~~~~~w~~~~~fL~~~~~~~~~~l~~~g~~d~~~~~~~~~~---~~--~~~~~~~~~~~i~v~g~~~~~~ 240 (1040)
......... ......... ....+.......+..+.......... .. ........+..|+||++||+++
T Consensus 148 ~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vDE~QD~~~ 220 (306)
T d1uaaa1 148 PSQAAASAI---GERDRIFAH----CYGLYDAHLKACNVLDFDDLILLPTLLLQANEEVRKRWQNKIRYLLVDEYQDTNT 220 (306)
T ss_dssp TTHHHHTCC---SHHHHHHHH----HHHHHHHHHHHHTCEEHHHHHHHHHHHHHHCHHHHHHHHTTCSEEEESCGGGCBH
T ss_pred CHHHHCCCC---CHHHHHHHH----HHHHHHHHHHHHHEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 001100111---115789999----9998777664553224316778766664028789999999754787777987308
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 7999999986148968998248632107888643342
Q gi|254780823|r 241 ATARLMSTVANHPNGAIVLPGLDCHIPTAIWNTITEK 277 (1040)
Q Consensus 241 ~~~~ll~al~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 277 (1040)
.+..++..+.+.+ ..++..+|+++..+.|+++...
T Consensus 221 ~~~~~l~~~~~~~--~~~~~~GD~~Q~Iy~f~ga~~~ 255 (306)
T d1uaaa1 221 SQYELVKLLVGSR--ARFTVVGDDDQSIYSWRGARPQ 255 (306)
T ss_dssp HHHHHHHHHHTTT--CCEEEECCGGGCCCGGGTBCTT
T ss_pred HHHHHHHHCCCCC--CCCEEEECCCCCEECCCCCCHH
T ss_conf 9886232002678--7415753475431011567768
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: DEXX box DNA helicase
species: Escherichia coli, RepD [TaxId: 562]