HHSEARCH alignment of GI: 254780823 and SCOP domain: d1w36b2

Alignment
>d1w36b2 c.37.1.19 (B:486-880) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.78  E-value=9.5e-17  Score=123.26  Aligned_cols=96  Identities=17%  Similarity=0.129  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHHHH-----------------CCCEEEEEECCCCHHHHHHHHHHHHCCCCC-CCCCCHHHHCHHHH
Q ss_conf             899999999999998642-----------------298499980264113578884355137776-65690035288989
Q gi|254780823|r  367 EREEAISIAIALRMSLDE-----------------NKKKSALITADRNLARRVKLELTRFGINID-ISAGIPLSTTLHSS  428 (1040)
Q Consensus       367 ~~~Ea~~ia~~lr~~~~~-----------------~~~~~avv~~d~~~~~~v~~~L~~~gipv~-~s~g~pL~~~p~v~  428 (1040)
                      ...+|..+|..|.+++..                 .+.+|||++|.......+..+|.+.|||+. .+++..+.+++.++
T Consensus        30 ~~~~A~~~A~~I~~ll~~~~~~~~~~~~~~~~r~v~~~DIAILvR~~~~~~~i~~aL~~~gIP~v~~~~~~~l~~~~ev~  109 (395)
T d1w36b2          30 QSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQ  109 (395)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCEEEEETTEEEECCGGGEEEEESSHHHHHHHHHHHHTTTCCEEETTCCCBGGGSSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
T ss_conf             99999999999999997120365300467776778814389998376669999999998599859935875432569999


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH
Q ss_conf             9999999983799978999986296545667938
Q gi|254780823|r  429 ILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEK  462 (1040)
Q Consensus       429 ~l~~ll~~~~~~~~~~~l~~LL~sPl~~~~~~~~  462 (1040)
                      +++++++++.+|.+..++.++|++|+++++..++
T Consensus       110 ~llalL~~l~~p~d~~~l~~~L~sp~~gl~~~~l  143 (395)
T d1w36b2         110 EMLWLLQAVMTPERENTLRSALATSMMGLNALDI  143 (395)
T ss_dssp             HHHHHHHHHTCTTSHHHHHHHHHSGGGTCCHHHH
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH
T ss_conf             9999999774556478899987085569999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Exodeoxyribonuclease V beta chain (RecB), N-terminal domain
species: Escherichia coli [TaxId: 562]