PSIBLAST alignment of GI: 254780823 and protein with PDB id: 2pjr
>gi|9257172|pdb|2PJR|A Chain A, Helicase Product Complex Length = 548
>gi|9257173|pdb|2PJR|F Chain F, Helicase Product Complex Length = 548
Score = 79.6 bits (194), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/437 (12%), Positives = 122/437 (27%), Gaps = 67/437 (15%)
Query: 46 SVTIYVPTKRAIQELRSEFIEITGKKS--TILPIIKSLGDVVEEKFTADLLLSYNLNPPV 103
++ T +A +E+R + G + I + + D+ +N
Sbjct: 58 NILAITFTNKAAREMRERVQSLLGGAAEDVW---ISTFHSMCVRILRRDI-DRIGINRNF 113
Query: 104 SNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEE 163
S + +L+ + I + K D K + + I + E
Sbjct: 114 SILDPTDQLSVMKTILKEKNIDPKKFEP------------------RTILGTISAAKNEL 155
Query: 164 KKWEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAE--- 220
E + ++ + + + +RL+ ++ + ++
Sbjct: 156 LPPEQFAK----RASTYYEKV---VSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPD 208
Query: 221 --HLMKGTKGPIIIAGSTGSIPATARLMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKS 278
H + I I + A L+ +A + D W ++
Sbjct: 209 VLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQN--ICAVGDADQSIYRWRGADIQN 266
Query: 279 TNITSSNTTYSTHPQYSLAKLLDFLDIKREDVKRLGNVSNEMYGRSMVISKSFLPPDTSD 338
+P + L + ++ V R
Sbjct: 267 ILSFE-----RDYPNAKVILLEQNYRSTKRILQAANEVIEHNVNR------------KPK 309
Query: 339 MRNTDILENKIPNIQKCFSDVALIEADNEREEAISIAIALRMSL---DENKKKSALITAD 395
T+ E K + EA NE +EA +A +R ++ + + A++
Sbjct: 310 RIWTENPEGKP---------ILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRT 360
Query: 396 RNLARRVKLELTRFGINIDISAGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLA 455
+R ++ L + I I G+ + + L I +D +++ ++ P
Sbjct: 361 NAQSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKR 420
Query: 456 KFGFPEKYLSRAKNALE 472
G A
Sbjct: 421 GIGASTIDKLVRYAADH 437