RPSBLAST alignment of GI: 254780823 and protein with PDBid: 2is6
>2is6_A DNA helicase II; hydrolase/DNA complex; HET: DNA ADP; 2.20A {Escherichia coli} PDB: 2is2_A* 2is1_A* 2is4_A* Length = 680
Score = 43.0 bits (100), Expect = 4e-04
Identities = 39/306 (12%), Positives = 90/306 (29%), Gaps = 39/306 (12%)
Query: 359 VALIEADNEREEAISIAIALRMSLDENKKKS--ALITADRNLARRVKLELTRFGINIDIS 416
++L A NE +EA + ++ D + A++ +R ++ L + + I
Sbjct: 318 ISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIY 377
Query: 417 AGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELVAL 476
G+ S L I ND A +V P G ++ L
Sbjct: 378 GGMRFFERQEIKDALSYLRLIVNRNDDAAFERVVNTP--TRGIGDRTLDV---------- 425
Query: 477 RGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVT 536
+ + + + T + L E+ L + +
Sbjct: 426 ----------------VRQTSRDRQLTLWQACRELLQEKA------LAGRAASALQRFME 463
Query: 537 YKTNKNSTCGNLSISDWTKLTVTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGS 596
++ + T + + + + + L L + +
Sbjct: 464 LIDALAQETADMPLHVQTDRVIKDSG--LRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521
Query: 597 CIKANAIEWIDIITRLIDGETVKPKIEKSSTLFILGTLE-SRLLNFDTLILGGLNEGVWP 655
+ + + E + + + L TL ++ L F + + G+ EG++P
Sbjct: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP 581
Query: 656 KNTAKN 661
+ +
Sbjct: 582 SQMSLD 587