RPSBLAST alignment of GI: 254780823 and protein with PDBid: 2is6

>2is6_A DNA helicase II; hydrolase/DNA complex; HET: DNA ADP; 2.20A {Escherichia coli} PDB: 2is2_A* 2is1_A* 2is4_A* Length = 680
 Score = 43.0 bits (100), Expect = 4e-04
 Identities = 39/306 (12%), Positives = 90/306 (29%), Gaps = 39/306 (12%)

Query: 359 VALIEADNEREEAISIAIALRMSLDENKKKS--ALITADRNLARRVKLELTRFGINIDIS 416
           ++L  A NE +EA  +   ++   D     +  A++      +R ++  L +  +   I 
Sbjct: 318 ISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIY 377

Query: 417 AGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELVAL 476
            G+            S L  I   ND  A   +V  P    G  ++ L            
Sbjct: 378 GGMRFFERQEIKDALSYLRLIVNRNDDAAFERVVNTP--TRGIGDRTLDV---------- 425

Query: 477 RGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVT 536
                           + + +  +  T     +  L E+       L       +   + 
Sbjct: 426 ----------------VRQTSRDRQLTLWQACRELLQEKA------LAGRAASALQRFME 463

Query: 537 YKTNKNSTCGNLSISDWTKLTVTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGS 596
                     ++ +   T   +          + +      +   + L  L +   +   
Sbjct: 464 LIDALAQETADMPLHVQTDRVIKDSG--LRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521

Query: 597 CIKANAIEWIDIITRLIDGETVKPKIEKSSTLFILGTLE-SRLLNFDTLILGGLNEGVWP 655
             +   +  +         E  + + +       L TL  ++ L F  + + G+ EG++P
Sbjct: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP 581

Query: 656 KNTAKN 661
              + +
Sbjct: 582 SQMSLD 587