HHsearch alignment for GI: 254780824 and conserved domain: COG1855
>COG1855 ATPase (PilT family) [General function prediction only].
Probab=94.55 E-value=0.033 Score=34.05 Aligned_cols=40 Identities=25% Similarity=0.437 Sum_probs=28.0
Q ss_pred HHHHHHHHCCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 99999984589-96999987878688999999997607888
Q gi|254780824|r 22 LGRHLASILRL-GDCLTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 22 la~~la~~l~~-g~ii~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 251 L~dkl~eRL~eraeGILIAG~PGaGKsTFaqAlAefy~~~G 291 (604)
T COG1855 251 LSDKLKERLEERAEGILIAGAPGAGKSTFAQALAEFYASQG 291 (604)
T ss_pred CCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 79899999886416469956999974689999999998669