HHsearch alignment for GI: 254780824 and conserved domain: COG1855

>COG1855 ATPase (PilT family) [General function prediction only].
Probab=94.55  E-value=0.033  Score=34.05  Aligned_cols=40  Identities=25%  Similarity=0.437  Sum_probs=28.0

Q ss_pred             HHHHHHHHCCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             99999984589-96999987878688999999997607888
Q gi|254780824|r   22 LGRHLASILRL-GDCLTLSGDLGSGKSFLARSIIRFLMHDD   61 (162)
Q Consensus        22 la~~la~~l~~-g~ii~L~GdLGaGKTtfvr~i~~~lg~~~   61 (162)
T Consensus       251 L~dkl~eRL~eraeGILIAG~PGaGKsTFaqAlAefy~~~G  291 (604)
T COG1855         251 LSDKLKERLEERAEGILIAGAPGAGKSTFAQALAEFYASQG  291 (604)
T ss_pred             CCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf             79899999886416469956999974689999999998669