HHsearch alignment for GI: 254780824 and conserved domain: PRK03839

Probab=93.70  E-value=0.084  Score=31.56  Aligned_cols=83  Identities=18%  Similarity=0.263  Sum_probs=46.4

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH----HHCCCCCCEEEEEEECCCCHHHHHCCCHHHHCCCCE
Q ss_conf             6999987878688999999997607888530245202011----003788608999865178977753058367508978
Q gi|254780824|r   34 DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLV----QLYDASIPVAHFDFYRLSSHQEVVELGFDEILNERI  109 (162)
Q Consensus        34 ~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~----~~Y~~~~~i~H~DlYRL~~~~E~~~lg~~e~~~~~i  109 (162)
T Consensus         1 M~I~ITGTPGtGKTTva~~La~~lg~~~i-~v--~~la~~~~~~~~~d~~---~~iD~d~l------~~~-~~~~~~~~~   67 (180)
T PRK03839          1 MIIAITGTPGVGKTTISKLLAEKLGYEYV-NL--RDFALEKGIGEEKDDE---LEIDVDEL------AYF-VEEEFKGKN   67 (180)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCEEE-EH--HHHHHHCCCCCCCCCC---CCCCHHHH------HHH-HHHHHCCCC
T ss_conf             98999789999989999999997698798-79--9999983998676775---04659999------999-998734898


Q ss_pred             EEEECHHHHHCCCCCCEEEEEEE
Q ss_conf             99998556320499540999998
Q gi|254780824|r  110 CIIEWPEIGRSLLPKKYIDIHLS  132 (162)
Q Consensus       110 ~lIEWpe~~~~~lp~~~i~I~i~  132 (162)
T Consensus        68 ~ivd~H--~~h~~p~D~-VIVLR   87 (180)
T PRK03839         68 VVLDGH--LSHLMPADL-VIVLR   87 (180)
T ss_pred             EEEEEE--CCCCCCCCE-EEEEE
T ss_conf             899864--314636877-99997