HHsearch alignment for GI: 254780824 and conserved domain: PRK05703

Probab=96.39  E-value=0.017  Score=35.81  Aligned_cols=101  Identities=14%  Similarity=0.166  Sum_probs=52.6

Q ss_pred             CCHHHHHHHHHHHHHHC--------CCCCEEEEECCCCCCHHHHHHHHHHHHCCCC----CCCCCCCHHHHHHHCCCC--
Q ss_conf             99899999999999845--------8996999987878688999999997607888----530245202011003788--
Q gi|254780824|r   14 PNEKNTICLGRHLASIL--------RLGDCLTLSGDLGSGKSFLARSIIRFLMHDD----ALEVLSPTFTLVQLYDAS--   79 (162)
Q Consensus        14 ~~~~~t~~la~~la~~l--------~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~----~~~V~SPTF~l~~~Y~~~--   79 (162)
T Consensus       183 ~~~~~~~~l~~~L~~~l~~~~~~~~~~~~vvalVGPTGVGKTTTiAKLAA~~~l~~~~~kV~lIT~DtyRigA~eQLk~Y  262 (412)
T PRK05703        183 NPREAWRYLLELLANMLPTRVEDILEQGGVVALVGPTGVGKTTTLAKLAARYALEEGKDKVALITLDTYRIGAVEQLKTY  262 (412)
T ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH
T ss_conf             97999999999999757888766545673699988888756769999999999972998179998376777799999999


Q ss_pred             CCEEEEEEECCCCHHHHHCCCHHHHCCCCEEEEECH
Q ss_conf             608999865178977753058367508978999985
Q gi|254780824|r   80 IPVAHFDFYRLSSHQEVVELGFDEILNERICIIEWP  115 (162)
Q Consensus        80 ~~i~H~DlYRL~~~~E~~~lg~~e~~~~~i~lIEWp  115 (162)
T Consensus       263 a~ilgvp~~v~~~~~~l~~a-l~~~~~~dlILIDTa  297 (412)
T PRK05703        263 AKIMGIPVKVAYDPKELAKA-LEQLANCDLILIDTA  297 (412)
T ss_pred             HHHCCCEEEEECCHHHHHHH-HHHHCCCCEEEEECC
T ss_conf             99719737984799999999-987158997999689