HHsearch alignment for GI: 254780824 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=95.96 E-value=0.0077 Score=37.84 Aligned_cols=137 Identities=13% Similarity=0.182 Sum_probs=73.0
Q ss_pred HHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC-CCCHHHHHHHCC-C-CCCEEEEEEECCCCHHH
Q ss_conf 999999845899---69999878786889999999976078885302-452020110037-8-86089998651789777
Q gi|254780824|r 22 LGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEV-LSPTFTLVQLYD-A-SIPVAHFDFYRLSSHQE 95 (162)
Q Consensus 22 la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V-~SPTF~l~~~Y~-~-~~~i~H~DlYRL~~~~E 95 (162)
T Consensus 24 iv~~L~nAI~~~RiaHAYLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~sC~~I~~g~h~DviEIdaasn~gIDe 103 (613)
T PRK05896 24 IKKILVNAILNNKLTHAYIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCSVCESINTNQSVDIVELDAASNNGVDE 103 (613)
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHH
T ss_conf 99999999984997622775589984889999999999669999999988888789998569999868840655578899
Q ss_pred HHCCCHHHH-CC-----CCEEEEECHHHHHC--------C---CCCCEEEEEEEECCC-------EEEEEEE----ECCH
Q ss_conf 530583675-08-----97899998556320--------4---995409999987398-------7699999----5860
Q gi|254780824|r 96 VVELGFDEI-LN-----ERICIIEWPEIGRS--------L---LPKKYIDIHLSQGKT-------GRKATIS----AERW 147 (162)
Q Consensus 96 ~~~lg~~e~-~~-----~~i~lIEWpe~~~~--------~---lp~~~i~I~i~~~~~-------~R~i~i~----~~~~ 147 (162)
T Consensus 104 IReL-ie~~~~~P~~gkyKV~IIDEah~Ln~~AaNALLKtLEEPP~~viFIL~Ttep~KLLpTIlSRCQrf~Fkri~~~~ 182 (613)
T PRK05896 104 IRNI-IDNINYLPTTFKYKVYIIDEAHMLSTSAWNALLKTLEEPPKHVVFIFATTEFQKIPLTIISRCQRYNFKKLNNSE 182 (613)
T ss_pred HHHH-HHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHCCCCEECCCCCHHH
T ss_conf 9999-997085875799459998162217999999999853489878379998288154937664035500178899899
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899999999986
Q gi|254780824|r 148 IISHINQMNRST 159 (162)
Q Consensus 148 ~~~~l~~~~~~~ 159 (162)
T Consensus 183 I~~~L~~I~~kE 194 (613)
T PRK05896 183 LQELLKSIAKKE 194 (613)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999973