HHsearch alignment for GI: 254780824 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=95.25 E-value=0.087 Score=31.48 Aligned_cols=133 Identities=17% Similarity=0.221 Sum_probs=72.4
Q ss_pred HHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH------HHHHCC-C-CCCEEEEEEECC
Q ss_conf 999999845899---69999878786889999999976078885302452020------110037-8-860899986517
Q gi|254780824|r 22 LGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFT------LVQLYD-A-SIPVAHFDFYRL 90 (162)
Q Consensus 22 la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~------l~~~Y~-~-~~~i~H~DlYRL 90 (162)
T Consensus 25 vv~~L~nai~~~ri~HAyLF~GprGtGKTT~ArilAkaLnC~~~----~~~~~pCg~C~~C~~I~~g~~~DViEiDaAs~ 100 (462)
T PRK06305 25 VVTVLKNALRFNRAAHAYLFSGIRGTGKTTLARIFAKALNCQNP----TEDQEPCNQCAICKEISSGTSLDVIEIDGASH 100 (462)
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC----CCCCCCCCCCHHHHHHHCCCCCCEEEECCCCC
T ss_conf 99999999984997623430389985999999999999679999----88889887668889986389998686435534
Q ss_pred CCHHHHHCCCHHHH-CC--C---CEEEEECHHHHHC--------C---CCCCEEEEEEEECCC-------EEEEEEE---
Q ss_conf 89777530583675-08--9---7899998556320--------4---995409999987398-------7699999---
Q gi|254780824|r 91 SSHQEVVELGFDEI-LN--E---RICIIEWPEIGRS--------L---LPKKYIDIHLSQGKT-------GRKATIS--- 143 (162)
Q Consensus 91 ~~~~E~~~lg~~e~-~~--~---~i~lIEWpe~~~~--------~---lp~~~i~I~i~~~~~-------~R~i~i~--- 143 (162)
T Consensus 101 ~gVddIRel-~e~v~~~P~~~~yKVyIIDEvhmLs~~AfNALLKtLEEPP~~v~FILaTTe~~KIp~TIlSRCQrf~F~~ 179 (462)
T PRK06305 101 RGIEDIRQI-NETVLFTPSKSQYKIYIIDEVHMLTKEAFNSLLKTLEEPPQHVKFFLATTEIHKIPGTILSRCQKMHLKR 179 (462)
T ss_pred CCHHHHHHH-HHHHCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCHHHHHHHHEEECCC
T ss_conf 466899999-9771008867750599981521179999999999861898774999981881428547876540233257
Q ss_pred -ECCHHHHHHHHHHHHH
Q ss_conf -5860899999999986
Q gi|254780824|r 144 -AERWIISHINQMNRST 159 (162)
Q Consensus 144 -~~~~~~~~l~~~~~~~ 159 (162)
T Consensus 180 i~~~~I~~~L~~I~~~E 196 (462)
T PRK06305 180 IPEETIIDKLALIAQQD 196 (462)
T ss_pred CCHHHHHHHHHHHHHHC
T ss_conf 99999999999999983