HHsearch alignment for GI: 254780824 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=95.74 E-value=0.047 Score=33.12 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=55.1
Q ss_pred HHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH---HCC-CC-CCEEEEEEECCCCH
Q ss_conf 999999845899---69999878786889999999976078885302452020110---037-88-60899986517897
Q gi|254780824|r 22 LGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQ---LYD-AS-IPVAHFDFYRLSSH 93 (162)
Q Consensus 22 la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~---~Y~-~~-~~i~H~DlYRL~~~ 93 (162)
T Consensus 24 v~~~L~nal~~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~~--~~~~pcg~C~~C~~i~~g~~~d~~EiDaAs~~~v 101 (717)
T PRK08853 24 VLTALENALAHNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETG--ITSTPCGQCATCKEIDEGRFVDLLEIDAASRTKV 101 (717)
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC--CCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCH
T ss_conf 99999999970997405761088988898999999998678999--9999788870267674478775245405656788
Q ss_pred HHHHCCCHHH--HCC----CCEEEEECHHHH
Q ss_conf 7753058367--508----978999985563
Q gi|254780824|r 94 QEVVELGFDE--ILN----ERICIIEWPEIG 118 (162)
Q Consensus 94 ~E~~~lg~~e--~~~----~~i~lIEWpe~~ 118 (162)
T Consensus 102 dd~rel-~~~~~y~p~~~~yKvyiiDEvHml 131 (717)
T PRK08853 102 EDTREL-LDNVQYKPARGRFKVYLIDEVHML 131 (717)
T ss_pred HHHHHH-HHHCCCCCCCCCEEEEEEECHHHC
T ss_conf 999999-985554887785479998305443