HHsearch alignment for GI: 254780824 and conserved domain: PRK11608

>PRK11608 pspF phage shock protein operon transcriptional activator; Provisional.

Probab=93.50  E-value=0.17  Score=29.73  Aligned_cols=41  Identities=15%  Similarity=0.306  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             89999999999984589969999878786889999999976
Q gi|254780824|r   16 EKNTICLGRHLASILRLGDCLTLSGDLGSGKSFLARSIIRF   56 (162)
Q Consensus        16 ~~~t~~la~~la~~l~~g~ii~L~GdLGaGKTtfvr~i~~~   56 (162)
T Consensus        12 S~~m~~v~~~~~~~A~~~~pVLI~GE~GtGK~~~Ar~IH~~   52 (325)
T PRK11608         12 ANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYL   52 (325)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHC
T ss_conf             99999999999999688999898898983799999999965