HHsearch alignment for GI: 254780824 and conserved domain: PRK12727

Probab=93.76  E-value=0.075  Score=31.85  Aligned_cols=84  Identities=14%  Similarity=0.175  Sum_probs=51.4

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHH----CCCCCCCCCCCHHHHHHHCCC--CCCEEEEEEECCCCHHHHHCCCHHHH
Q ss_conf             899699998787868899999999760----788853024520201100378--86089998651789777530583675
Q gi|254780824|r   31 RLGDCLTLSGDLGSGKSFLARSIIRFL----MHDDALEVLSPTFTLVQLYDA--SIPVAHFDFYRLSSHQEVVELGFDEI  104 (162)
Q Consensus        31 ~~g~ii~L~GdLGaGKTtfvr~i~~~l----g~~~~~~V~SPTF~l~~~Y~~--~~~i~H~DlYRL~~~~E~~~lg~~e~  104 (162)
T Consensus       346 ~~gGv~AlvGpTGvGKTTT~aKlAa~~~~~~g~~~valit~DtyRiga~eQL~~y~~ilgvpv~~~~~~~~l~~~-l~~l  424 (557)
T PRK12727        346 ERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHEADSAESLLDL-LERL  424 (557)
T ss_pred             HCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHH-HHHH
T ss_conf             407647874377767311799999999997399818999726640879999999999839757982899999999-9983


Q ss_pred             CCCCEEEEECH
Q ss_conf             08978999985
Q gi|254780824|r  105 LNERICIIEWP  115 (162)
Q Consensus       105 ~~~~i~lIEWp  115 (162)
T Consensus       425 ~~~~lvliDTa  435 (557)
T PRK12727        425 RDYKLVLIDTA  435 (557)
T ss_pred             CCCCEEEEECC
T ss_conf             69998999499