HHsearch alignment for GI: 254780824 and conserved domain: PRK13341

Probab=93.54  E-value=0.083  Score=31.60  Aligned_cols=82  Identities=21%  Similarity=0.263  Sum_probs=47.1

Q ss_pred             HHHHCCCCC--EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC-------------CCCCCEEEEE-EEC
Q ss_conf             998458996--999987878688999999997607888530245202011003-------------7886089998-651
Q gi|254780824|r   26 LASILRLGD--CLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLY-------------DASIPVAHFD-FYR   89 (162)
Q Consensus        26 la~~l~~g~--ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y-------------~~~~~i~H~D-lYR   89 (162)
T Consensus        43 Lrr~i~~~~~~S~Il~GPPGtGKTTLA~iIA~~t~~~F~--~lsAv~sgvkdlr~ii~~A~~~~~~~g~~tILFIDEIHR  120 (726)
T PRK13341         43 LRRAIKADRVGSLILYGPPGVGKTTLARIIANHTRAHFS--SLNAVLAGVKDLRAEVDAAKERLERHGKRTILFIDEVHR  120 (726)
T ss_pred             HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE--EEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
T ss_conf             999997699982788897999999999999887488679--985620377999999999999987459965999862542


Q ss_pred             CCCHHHHHCCCHHHHCCCC-EEEE
Q ss_conf             7897775305836750897-8999
Q gi|254780824|r   90 LSSHQEVVELGFDEILNER-ICII  112 (162)
Q Consensus        90 L~~~~E~~~lg~~e~~~~~-i~lI  112 (162)
T Consensus       121 fNK~QQ--D~-LLp~vE~G~i~LI  141 (726)
T PRK13341        121 FNKAQQ--DA-LLPWVENGTVTLI  141 (726)
T ss_pred             CCHHHH--HH-HHHHHCCCEEEEE
T ss_conf             588789--98-7888606838999