HHsearch alignment for GI: 254780824 and conserved domain: PRK13851
>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=96.52 E-value=0.0037 Score=39.74 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=34.1
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 99999998458996999987878688999999997607888
Q gi|254780824|r 21 CLGRHLASILRLGDCLTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 21 ~la~~la~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 150 ~~~~fL~~aV~~r~NIlIsGgTGSGKTTllnALl~~IP~~e 190 (343)
T PRK13851 150 DLEAFLHACVVGRLTMLLCGPTGSGKTTMSKTLISAIPPQE 190 (343)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
T ss_conf 79999999997698899988898619999999996289655