HHsearch alignment for GI: 254780824 and conserved domain: PRK13900
>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=96.79 E-value=0.0025 Score=40.78 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=34.4
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 99999998458996999987878688999999997607888
Q gi|254780824|r 21 CLGRHLASILRLGDCLTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 21 ~la~~la~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 148 ~~~~fL~~aV~~r~NilI~G~TgSGKTTll~aL~~~ip~~e 188 (332)
T PRK13900 148 KIKEFLEHAVISKKNIIISGGTSTGKTTFTNAALREIPAIE 188 (332)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
T ss_conf 79999999986487199988889889999999983589535