HHsearch alignment for GI: 254780824 and conserved domain: TIGR02173

>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=94.95  E-value=0.029  Score=34.39  Aligned_cols=107  Identities=19%  Similarity=0.215  Sum_probs=54.8

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC---------HHHH-HHHCC-CCCCEEEEEEECCCCHHHHHCCCHH
Q ss_conf             69999878786889999999976078885302452---------0201-10037-8860899986517897775305836
Q gi|254780824|r   34 DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSP---------TFTL-VQLYD-ASIPVAHFDFYRLSSHQEVVELGFD  102 (162)
Q Consensus        34 ~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SP---------TF~l-~~~Y~-~~~~i~H~DlYRL~~~~E~~~lg~~  102 (162)
T Consensus         1 M~I~ISGpPGSGktTvA~~lA~~Lsl~~---iSaG~iRelA~~~Gldl~E~~~aee~~eID----------k~iD~-~~~   66 (173)
T TIGR02173         1 MIITISGPPGSGKTTVAKILAEKLSLKL---ISAGDIRELAEKMGLDLAESKYAEENPEID----------KKIDR-RIR   66 (173)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCE---ECCCHHHHHHHHCCCCHHHHHHHCCCCCCC----------HHHHH-HHH
T ss_conf             9788735896864789999998639831---202007889864298877734430586311----------67537-885


Q ss_pred             HHC-CCCEEEEECHHHHHCCCCC-----CEEEEEEEECCCEEEEEE--EECCHHHHHHHHHH
Q ss_conf             750-8978999985563204995-----409999987398769999--95860899999999
Q gi|254780824|r  103 EIL-NERICIIEWPEIGRSLLPK-----KYIDIHLSQGKTGRKATI--SAERWIISHINQMN  156 (162)
Q Consensus       103 e~~-~~~i~lIEWpe~~~~~lp~-----~~i~I~i~~~~~~R~i~i--~~~~~~~~~l~~~~  156 (162)
T Consensus        67 E~A~~~~nvvlE--srlagW~~~~nG~yaD~~iyL~A~levRA~RIA~Re~k~~~~A~~~~~  126 (173)
T TIGR02173        67 EIAEKEKNVVLE--SRLAGWILKKNGEYADVKIYLKAPLEVRARRIAKRENKDLTVALKEII  126 (173)
T ss_pred             HHHCCCCCEEEE--EHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             543048966885--205433115788967567886088333243321136889899999999