HHsearch alignment for GI: 254780824 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=94.95 E-value=0.029 Score=34.39 Aligned_cols=107 Identities=19% Similarity=0.215 Sum_probs=54.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC---------HHHH-HHHCC-CCCCEEEEEEECCCCHHHHHCCCHH
Q ss_conf 69999878786889999999976078885302452---------0201-10037-8860899986517897775305836
Q gi|254780824|r 34 DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSP---------TFTL-VQLYD-ASIPVAHFDFYRLSSHQEVVELGFD 102 (162)
Q Consensus 34 ~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SP---------TF~l-~~~Y~-~~~~i~H~DlYRL~~~~E~~~lg~~ 102 (162)
T Consensus 1 M~I~ISGpPGSGktTvA~~lA~~Lsl~~---iSaG~iRelA~~~Gldl~E~~~aee~~eID----------k~iD~-~~~ 66 (173)
T TIGR02173 1 MIITISGPPGSGKTTVAKILAEKLSLKL---ISAGDIRELAEKMGLDLAESKYAEENPEID----------KKIDR-RIR 66 (173)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCE---ECCCHHHHHHHHCCCCHHHHHHHCCCCCCC----------HHHHH-HHH
T ss_conf 9788735896864789999998639831---202007889864298877734430586311----------67537-885
Q ss_pred HHC-CCCEEEEECHHHHHCCCCC-----CEEEEEEEECCCEEEEEE--EECCHHHHHHHHHH
Q ss_conf 750-8978999985563204995-----409999987398769999--95860899999999
Q gi|254780824|r 103 EIL-NERICIIEWPEIGRSLLPK-----KYIDIHLSQGKTGRKATI--SAERWIISHINQMN 156 (162)
Q Consensus 103 e~~-~~~i~lIEWpe~~~~~lp~-----~~i~I~i~~~~~~R~i~i--~~~~~~~~~l~~~~ 156 (162)
T Consensus 67 E~A~~~~nvvlE--srlagW~~~~nG~yaD~~iyL~A~levRA~RIA~Re~k~~~~A~~~~~ 126 (173)
T TIGR02173 67 EIAEKEKNVVLE--SRLAGWILKKNGEYADVKIYLKAPLEVRARRIAKRENKDLTVALKEII 126 (173)
T ss_pred HHHCCCCCEEEE--EHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 543048966885--205433115788967567886088333243321136889899999999