HHsearch alignment for GI: 254780824 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=95.34 E-value=0.05 Score=32.95 Aligned_cols=68 Identities=18% Similarity=0.275 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHCC-CC--CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC-CCEEEEEEECCC
Q ss_conf 8999999999998458-99--6999987878688999999997607888530245202011003788-608999865178
Q gi|254780824|r 16 EKNTICLGRHLASILR-LG--DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLYDAS-IPVAHFDFYRLS 91 (162)
Q Consensus 16 ~~~t~~la~~la~~l~-~g--~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y~~~-~~i~H~DlYRL~ 91 (162)
T Consensus 23 deqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~------------~~~d~~D~~~~~~NC~~~~ 90 (383)
T TIGR02928 23 DEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAA------------EDRDVRDVSTVYINCQILD 90 (383)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH------------HCCCCCCEEEEEECCCCCC
T ss_conf 7899999999887506748987258878889878899999999999986------------2269971589997785468
Q ss_pred CHHH
Q ss_conf 9777
Q gi|254780824|r 92 SHQE 95 (162)
Q Consensus 92 ~~~E 95 (162)
T Consensus 91 T~y~ 94 (383)
T TIGR02928 91 TSYQ 94 (383)
T ss_pred CHHH
T ss_conf 4699