HHsearch alignment for GI: 254780824 and conserved domain: cd00464
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.
Probab=95.76 E-value=0.011 Score=36.83 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=24.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 99987878688999999997607888
Q gi|254780824|r 36 LTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 36 i~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 2 I~LiG~~G~GKstigk~la~~l~~~f 27 (154)
T cd00464 2 IVLIGMMGAGKTTVGRLLAKALGLPF 27 (154)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCE
T ss_conf 89988999988999999999979897