HHsearch alignment for GI: 254780824 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=93.52 E-value=0.25 Score=28.70 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=25.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 89969999878786889999999976078
Q gi|254780824|r 31 RLGDCLTLSGDLGSGKSFLARSIIRFLMH 59 (162)
Q Consensus 31 ~~g~ii~L~GdLGaGKTtfvr~i~~~lg~ 59 (162)
T Consensus 78 ~~~GlilitGptGSGKtTtl~a~l~~~~~ 106 (264)
T cd01129 78 KPHGIILVTGPTGSGKTTTLYSALSELNT 106 (264)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 89988999789999779999999986436