HHsearch alignment for GI: 254780824 and conserved domain: cd01131
>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.
Probab=94.20 E-value=0.067 Score=32.15 Aligned_cols=28 Identities=25% Similarity=0.463 Sum_probs=24.0
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 6999987878688999999997607888
Q gi|254780824|r 34 DCLTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 34 ~ii~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 2 GliLitG~TGSGKTTtl~all~~i~~~~ 29 (198)
T cd01131 2 GLVLVTGPTGSGKSTTLAAMIDYINKNK 29 (198)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 3899989999979999999998536378