HHsearch alignment for GI: 254780824 and conserved domain: cd01893

>cd01893 Miro1 Miro1 subfamily. Miro (mitochondrial Rho) proteins have tandem GTP-binding domains separated by a linker region containing putative calcium-binding EF hand motifs. Genes encoding Miro-like proteins were found in several eukaryotic organisms. This CD represents the N-terminal GTPase domain of Miro proteins. These atypical Rho GTPases have roles in mitochondrial homeostasis and apoptosis. Most Rho proteins contain a lipid modification site at the C-terminus; however, Miro is one of few Rho subfamilies that lack this feature.
Probab=93.29  E-value=0.3  Score=28.26  Aligned_cols=60  Identities=20%  Similarity=0.195  Sum_probs=34.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC-CCCCCEEEEEEECCCCHHHHHCC
Q ss_conf             99987878688999999997607888530245202011003-78860899986517897775305
Q gi|254780824|r   36 LTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLY-DASIPVAHFDFYRLSSHQEVVEL   99 (162)
Q Consensus        36 i~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y-~~~~~i~H~DlYRL~~~~E~~~l   99 (162)
T Consensus         3 iv~vGd~~VGKTsli~r~~~~~F~~~----~~~t~~~~~~~~~~~~~~v~l~i~DtaG~e~~~~~   63 (166)
T cd01893           3 IVLIGDEGVGKSSLIMSLVSEEFPEN----VPRVLPEITIPADVTPERVPTTIVDTSSRPQDRAN   63 (166)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCC----CCCCCCCEEEEEEECCEEEEEEEEECCCCCCCCHH
T ss_conf             99999999899999999984978887----77634568999998890999999989987230245