HHsearch alignment for GI: 254780824 and conserved domain: cd03213
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=95.53 E-value=0.013 Score=36.49 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=26.0
Q ss_pred HHHHCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 998458996999987878688999999997
Q gi|254780824|r 26 LASILRLGDCLTLSGDLGSGKSFLARSIIR 55 (162)
Q Consensus 26 la~~l~~g~ii~L~GdLGaGKTtfvr~i~~ 55 (162)
T Consensus 28 vs~~v~~Gei~~ilGpnGaGKSTLl~~l~G 57 (194)
T cd03213 28 VSGKAKPGELTAIMGPSGAGKSTLLNALAG 57 (194)
T ss_pred CEEEEECCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 388990881999998999519999999857