HHsearch alignment for GI: 254780824 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=95.49 E-value=0.016 Score=35.95 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=27.5
Q ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 45899699998787868899999999760788
Q gi|254780824|r 29 ILRLGDCLTLSGDLGSGKSFLARSIIRFLMHD 60 (162)
Q Consensus 29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~ 60 (162)
T Consensus 22 ~v~~Gei~~llGpNGAGKSTll~~i~Gl~~p~ 53 (232)
T cd03218 22 SVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD 53 (232)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 98999599999999961999999997799998