HHsearch alignment for GI: 254780824 and conserved domain: cd03226
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=95.97 E-value=0.0079 Score=37.75 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=27.7
Q ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 45899699998787868899999999760788
Q gi|254780824|r 29 ILRLGDCLTLSGDLGSGKSFLARSIIRFLMHD 60 (162)
Q Consensus 29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~ 60 (162)
T Consensus 22 ~i~~Gei~~iiG~nGaGKSTLl~~i~Gl~~p~ 53 (205)
T cd03226 22 DLYAGEIIALTGKNGAGKTTLAKILAGLIKES 53 (205)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 88699899998899998999999995685777