HHsearch alignment for GI: 254780824 and conserved domain: cd03230
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.66 E-value=0.013 Score=36.53 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=27.4
Q ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 45899699998787868899999999760788
Q gi|254780824|r 29 ILRLGDCLTLSGDLGSGKSFLARSIIRFLMHD 60 (162)
Q Consensus 29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~ 60 (162)
T Consensus 22 ~i~~Gei~gl~G~NGaGKSTLl~~i~Gl~~p~ 53 (173)
T cd03230 22 TVEKGEIYGLLGPNGAGKTTLIKIILGLLKPD 53 (173)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 88799399998789979999999997685778