HHsearch alignment for GI: 254780824 and conserved domain: cd03269
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.78 E-value=0.013 Score=36.56 Aligned_cols=32 Identities=28% Similarity=0.482 Sum_probs=28.0
Q ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 45899699998787868899999999760788
Q gi|254780824|r 29 ILRLGDCLTLSGDLGSGKSFLARSIIRFLMHD 60 (162)
Q Consensus 29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~ 60 (162)
T Consensus 22 ~v~~Gei~gllG~NGaGKTTll~~i~Gl~~p~ 53 (210)
T cd03269 22 SVEKGEIFGLLGPNGAGKTTTIRMILGIILPD 53 (210)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 88799599999899984999999996002668